mgf000047m (Mimulus guttatus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 mgf000047m T250530_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.826 0.658
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.826 0.658
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf000047m MADF 101 181

Links

Other MADF family TFs
Other Mimulus guttatus TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.000
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.000
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.000
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.000
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.000
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.820
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.000
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.000
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.000
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.882
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.868
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.870
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.835
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.000
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.855
OBART05G25610 Oryza barthii OBART05G25610 I 0.000
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.000
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.000
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.000
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.000
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.000
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.000
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.000
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.000
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.000
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.000
OS01G0674000 Oryza sativa OS01G0674000 N 0.000
OS05G0560600 Oryza sativa OS05G0560600 I 0.000
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.000
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.000
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.000
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.000
Si022565m.g Setaria italica Si022565m.g I 0.000
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.000