gene05318-v1.0-hybrid (Fragaria vesca)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 gene05318-v1.0-hybrid T250682_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna05318.1-v1.0-hybrid MADF 64 143

Links

Other MADF family TFs
Other Fragaria vesca TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29709.m001180 Ricinus communis 29709.m001180 N 0.919
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.821
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.846
Bo3g037360 Brassica oleracea Bo3g037360 N 0.883
Bo4g023990 Brassica oleracea Bo4g023990 N 0.847
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.846
Bra000360 Brassica rapa Bra000360 N 0.883
Bra004859 Brassica rapa Bra004859 N 0.832
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.883
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.883
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.942
Ca_06067 Cicer arietinum Ca_06067 N 0.879
Ca_06795 Cicer arietinum Ca_06795 N 0.938
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.901
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.959
Cla021714 Citrullus lanatus Cla021714 N 0.947
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.947
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.947
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.846
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.938
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.905
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.882
GLYMA19G29640 Glycine max GLYMA19G29640 N 0.867
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.924
MDP0000557282 Malus domestica MDP0000557282 N 0.960
mgf005560m Mimulus guttatus mgf005560m N 0.813
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.908
MTR_7g081190 Medicago truncatula MTR_7g081190 N 0.822
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.959
PK17306.1 Cannabis sativa PK17306.1 N 0.933
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.922
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.940
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.939
TCM_005773 Theobroma cacao TCM_005773 N 0.924
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.835
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.861