MDP0000301451 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000301451 T250771_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.936 0.708
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.936 0.708
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000301451 MADF 47 127

Links

Other MADF family TFs
Other Malus domestica TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29648.m001919 Ricinus communis 29648.m001919 N
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N
cassava26784.m1 Manihot esculenta cassava26784.m1 N
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N
Ca_03920 Cicer arietinum Ca_03920 N
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N
Cucsa.079150 Cucumis sativus Cucsa.079150 N
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N
GLYMA04G42090 Glycine max GLYMA04G42090 N
GLYMA06G12701 Glycine max GLYMA06G12701 N
GLYMA13G09220 Glycine max GLYMA13G09220 N
GLYMA14G27290 Glycine max GLYMA14G27290 N
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N
Lus10029747.g Linum usitatissimum Lus10029747.g N
Lus10042776.g Linum usitatissimum Lus10042776.g N
MDP0000727836 Malus domestica MDP0000727836 N
MDP0000859087 Malus domestica MDP0000859087 N
mgf010500m Mimulus guttatus mgf010500m N
MTR_1g029420 Medicago truncatula MTR_1g029420 N
MTR_3g089055 Medicago truncatula MTR_3g089055 N
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N
PK29476.1 Cannabis sativa PK29476.1 N
Pm022704 Prunus mume Pm022704 N
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N
SCL1 Vitis vinifera VIT_18s0001g15270 N
TCM_035362 Theobroma cacao TCM_035362 N
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N