Thhalv10001488m.g (Eutrema salsugineum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Thhalv10001488m.g T250864_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10001488m MADF 80 163

Links

Other MADF family TFs
Other Eutrema salsugineum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29709.m001180 Ricinus communis 29709.m001180 N 0.895
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.828
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.948
Bo3g037360 Brassica oleracea Bo3g037360 N 0.924
Bo4g023990 Brassica oleracea Bo4g023990 N 0.891
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.948
Bra000360 Brassica rapa Bra000360 N 0.924
Bra004859 Brassica rapa Bra004859 N 0.872
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.915
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.915
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.897
Ca_06067 Cicer arietinum Ca_06067 N 0.834
Ca_06795 Cicer arietinum Ca_06795 N 0.850
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.861
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.872
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.847
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.941
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.835
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.850
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.872
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.866
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.902
GRMZM2G379179 Zea mays GRMZM2G379179 N 0.818
GRMZM5G850092 Zea mays GRMZM5G850092 N 0.818
MDP0000557282 Malus domestica MDP0000557282 N 0.840
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.863
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.872
PK17306.1 Cannabis sativa PK17306.1 N 0.844
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.899
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.901
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.894
TCM_005773 Theobroma cacao TCM_005773 N 0.906
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.836