Bra025607 (Brassica rapa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bra025607 T253321_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025607.1-P MADS box 21 63

Links

Other MADS box family TFs
Other Brassica rapa TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL43 Arabidopsis thaliana AT5G40220 I 0.837
AGL75 Arabidopsis thaliana AT5G41200 I 0.837
AGL76 Arabidopsis thaliana AT5G40120 I 0.837
AGL77 Arabidopsis thaliana AT5G38740 I 0.837
AGL81 Arabidopsis thaliana AT5G39750 I 0.837
AGL98 Arabidopsis thaliana AT5G39810 I 0.814
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.837
Bo4g139260 Brassica oleracea Bo4g139260 I 0.837
Bo4g139560 Brassica oleracea Bo4g139560 N 0.953
Bo4g139620 Brassica oleracea Bo4g139620 N 0.953
Bo4g139640 Brassica oleracea Bo4g139640 N 0.953
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.744
Bostr.3751s0030 Boechera stricta Bostr.3751s0030 I 0.744
Bostr.3751s0043 Boechera stricta Bostr.3751s0043 I 0.721
Bra025609 Brassica rapa Bra025609 I 0.930
Bra025619 Brassica rapa Bra025619 N 0.953
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.814
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.837
Thhalv10005313m.g Eutrema salsugineum Thhalv10005313m.g I 0.721
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I 0.814
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.814