Bostr.3751s0043 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.3751s0043 T257636_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.809 0.809
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.3751s0043.1.p MADS box 59 105

Links

Other MADS box family TFs
Other Boechera stricta TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.3751s0031 Boechera stricta Bostr.3751s0031 I 0.957
Bostr.3751s0039 Boechera stricta Bostr.3751s0039 I 0.936
Bostr.3751s0030 Boechera stricta Bostr.3751s0030 I 0.936
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.915
Bostr.3751s0025 Boechera stricta Bostr.3751s0025 I 0.875
AGL76 Arabidopsis thaliana AT5G40120 I 0.851
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.851
AGL77 Arabidopsis thaliana AT5G38740 I 0.851
AGL81 Arabidopsis thaliana AT5G39750 I 0.851
AGL98 Arabidopsis thaliana AT5G39810 I 0.830
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.830
AGL75 Arabidopsis thaliana AT5G41200 I 0.818
Bra031864 Brassica rapa Bra031864 I 0.809
fgenesh2_kg.8__2584__AT5G65330.1 Arabidopsis lyrata fgenesh2_kg.8__2584__AT5G65330.1 I 0.809
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.809
Bo00615s090 Brassica oleracea Bo00615s090 I 0.809
AGL105 Arabidopsis thaliana AT5G37415 I 0.808
AGL78 Arabidopsis thaliana AT5G65330 D 0.792
AGL51 Arabidopsis thaliana AT4G02235 I 0.787
AGL43 Arabidopsis thaliana AT5G40220 I 0.787
Thhalv10005313m.g Eutrema salsugineum Thhalv10005313m.g I 0.787
AGL52 Arabidopsis thaliana AT4G11250 I 0.766
Carubv10006654m.g Capsella rubella Carubv10006654m.g I 0.766
Bostr.0568s0255 Boechera stricta Bostr.0568s0255 I 0.766
Carubv10007591m.g Capsella rubella Carubv10007591m.g I 0.745
Bra025609 Brassica rapa Bra025609 I 0.745
Bra025607 Brassica rapa Bra025607 N 0.721
AGL54 Arabidopsis thaliana AT5G27090 N 0.702
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.702
Carubv10015986m.g Capsella rubella Carubv10015986m.g I 0.702
Bra022341 Brassica rapa Bra022341 I 0.702
Cagra.1681s0033 Capsella grandiflora Cagra.1681s0033 I 0.702
Carubv10003642m.g Capsella rubella Carubv10003642m.g N 0.702
Bo5g117290 Brassica oleracea Bo5g117290 I 0.702