Bostr.0568s0255 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.0568s0255 T257555_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.870 0.870
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0568s0255.1.p MADS box 5 50

Links

Other MADS box family TFs
Other Boechera stricta TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.8__2584__AT5G65330.1 Arabidopsis lyrata fgenesh2_kg.8__2584__AT5G65330.1 I 0.913
AGL51 Arabidopsis thaliana AT4G02235 I 0.848
AGL78 Arabidopsis thaliana AT5G65330 D 0.833
AGL52 Arabidopsis thaliana AT4G11250 I 0.826
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.783
Thhalv10005313m.g Eutrema salsugineum Thhalv10005313m.g I 0.783
Bostr.3751s0043 Boechera stricta Bostr.3751s0043 I 0.766
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.761
AGL77 Arabidopsis thaliana AT5G38740 I 0.761
AGL81 Arabidopsis thaliana AT5G39750 I 0.761
AGL76 Arabidopsis thaliana AT5G40120 I 0.761
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.761
Bostr.3751s0031 Boechera stricta Bostr.3751s0031 I 0.761
Bo00615s090 Brassica oleracea Bo00615s090 I 0.739
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.739
Cagra.1681s0033 Capsella grandiflora Cagra.1681s0033 I 0.739
Carubv10015986m.g Capsella rubella Carubv10015986m.g I 0.739
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.739
AGL105 Arabidopsis thaliana AT5G37415 I 0.731
Bostr.3751s0030 Boechera stricta Bostr.3751s0030 I 0.729
Bostr.3751s0039 Boechera stricta Bostr.3751s0039 I 0.729
AGL75 Arabidopsis thaliana AT5G41200 I 0.727
AGL98 Arabidopsis thaliana AT5G39810 I 0.723
Carubv10007591m.g Capsella rubella Carubv10007591m.g I 0.723
AGL43 Arabidopsis thaliana AT5G40220 I 0.717
Bra031864 Brassica rapa Bra031864 I 0.717
Bostr.25375s0045 Boechera stricta Bostr.25375s0045 I 0.717
Carubv10006654m.g Capsella rubella Carubv10006654m.g I 0.717
Carubv10007456m.g Capsella rubella Carubv10007456m.g I 0.717
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I 0.717
Carubv10015354m.g Capsella rubella Carubv10015354m.g I 0.702