Pavir.Aa01999 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.Aa01999 T258847_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa01999.1.p MADS box 10 56

Links

Other MADS box family TFs
Other Panicum virgatum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA003304 Oryza indica BGIOSGA003304 N 0.717
GRMZM5G839969 Zea mays GRMZM5G839969 N 0.783
GRMZM5G853066 Zea mays GRMZM5G853066 N 0.804
ONIVA01G14280 Oryza nivara ONIVA01G14280 N 0.717
OPUNC01G11730 Oryza punctata OPUNC01G11730 N 0.717
ORUFI01G13020 Oryza rufipogon ORUFI01G13020 N 0.717
Pavir.Ab01824 Panicum virgatum Pavir.Ab01824 N 0.935
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.783
Pavir.J14267 Panicum virgatum Pavir.J14267 N 0.826
Si019470m.g Setaria italica Si019470m.g N 0.717