CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC01G11730
(
Oryza punctata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OPUNC01G11730
T255287_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G11730.1
MADS box
10
58
RIANDATRRATFKKRRRGLVKKASELATLCDVDACLVVYGEGDAEPEVW
Links
Other
MADS box
family TFs
Other
Oryza punctata
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA003304
Oryza indica
BGIOSGA003304
N
0.979
OBART01G12050
Oryza barthii
OBART01G12050
N
0.979
OGLUM01G13490
Oryza glumaepatula
OGLUM01G13490
N
0.979
ONIVA01G14280
Oryza nivara
ONIVA01G14280
N
0.979
ORGLA01G0101700
Oryza glaberrima
ORGLA01G0101700
N
0.979
ORUFI01G13020
Oryza rufipogon
ORUFI01G13020
N
0.979
OB01G21750
Oryza brachyantha
OB01G21750
N
0.915
GRMZM5G853066
Zea mays
GRMZM5G853066
N
0.833
Pavir.Ib03850
Panicum virgatum
Pavir.Ib03850
N
0.771
GRMZM5G839969
Zea mays
GRMZM5G839969
N
0.750
OB03G33030
Oryza brachyantha
OB03G33030
N
0.750
Pavir.J14267
Panicum virgatum
Pavir.J14267
N
0.750
GSMUA_AchrUn_randomG17230_001
Musa acuminata
GSMUA_AchrUn_randomG17230_001
N
0.729
Pavir.Aa01999
Panicum virgatum
Pavir.Aa01999
N
0.717
OBART03G24330
Oryza barthii
OBART03G24330
N
0.702
OGLUM03G25150
Oryza glumaepatula
OGLUM03G25150
N
0.702
OMERI03G22160
Oryza meridionalis
OMERI03G22160
N
0.702
ONIVA03G25700
Oryza nivara
ONIVA03G25700
N
0.702
ORGLA03G0226500
Oryza glaberrima
ORGLA03G0226500
N
0.702