OBART01G12050 (Oryza barthii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OBART01G12050 T254942_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART01G12050.1 MADS box 10 58

Links

Other MADS box family TFs
Other Oryza barthii TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM01G13490 Oryza glumaepatula OGLUM01G13490 N 1.000
ORGLA01G0101700 Oryza glaberrima ORGLA01G0101700 N 1.000
OPUNC01G11730 Oryza punctata OPUNC01G11730 N 0.979
BGIOSGA003304 Oryza indica BGIOSGA003304 N 0.958
ONIVA01G14280 Oryza nivara ONIVA01G14280 N 0.958
ORUFI01G13020 Oryza rufipogon ORUFI01G13020 N 0.958
OB01G21750 Oryza brachyantha OB01G21750 N 0.894
GRMZM5G853066 Zea mays GRMZM5G853066 N 0.812
GRMZM5G839969 Zea mays GRMZM5G839969 N 0.778
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.771
Si019470m.g Setaria italica Si019470m.g N 0.762
Pavir.J14267 Panicum virgatum Pavir.J14267 N 0.761
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.733
OB03G33030 Oryza brachyantha OB03G33030 N 0.729
LPERR02G10380 Leersia perrieri LPERR02G10380 N 0.711
GSMUA_AchrUn_randomG17230_001 Musa acuminata GSMUA_AchrUn_randomG17230_001 N 0.708