CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_05001
(
Colletotrichum orbiculare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Cob_05001
T268788_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02182
M01273_2.00
Neurospora crassa
WACCCAB
VTGGGTW
PBM
Lambert et al.(2019)
pTH8920
0.814
0.857
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH86946
Myb
246
295
RRKWSEAETNHLLLGVNRHGVGKWTDILADPDFNFNDRTAGDLKDRFRTC
ENH86946
Myb
393
441
RRPFTDQDDKQILEGLDKYGPAWTKIQRDPRFSLSGRQPTDLRDRVRNK
Links
Other
Myb/SANT
family TFs
Other
Colletotrichum orbiculare
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30076.m004659
Ricinus communis
30076.m004659
I
0.000
30131.m007078
Ricinus communis
30131.m007078
I
0.000
ATBZIP53
Arabidopsis lyrata
fgenesh2_kg.5__2740__AT3G62420.1
I
0.000
BGIOSGA019116
Oryza indica
BGIOSGA019116
N
0.000
Bo6g079450
Brassica oleracea
Bo6g079450
I
0.000
Bo8g097830
Brassica oleracea
Bo8g097830
I
0.000
Bra003500
Brassica rapa
Bra003500
I
0.000
Bra007679
Brassica rapa
Bra007679
I
0.000
BZIP53
Arabidopsis thaliana
AT3G62420
D
0.000
Cagra.0483s0006
Capsella grandiflora
Cagra.0483s0006
I
0.000
Carubv10018852m.g
Capsella rubella
Carubv10018852m.g
I
0.000
cassava23775.valid.m1
Manihot esculenta
cassava23775.valid.m1
I
0.000
cassava24775.valid.m1
Manihot esculenta
cassava24775.valid.m1
I
0.000
cassava40461.m1
Manihot esculenta
cassava40461.m1
I
0.000
cassava41140.m1
Manihot esculenta
cassava41140.m1
I
0.000
Ca_01004
Cicer arietinum
Ca_01004
I
0.000
Ca_03512
Cicer arietinum
Ca_03512
I
0.000
Ciclev10022730m.g
Citrus clementina
Ciclev10022730m.g
I
0.000
Ciclev10029834m.g
Citrus clementina
Ciclev10029834m.g
I
0.000
Cla016841
Citrullus lanatus
Cla016841
I
0.000
Cucsa.109420
Cucumis sativus
Cucsa.109420
I
0.000
evm.TU.supercontig_18.43
Carica papaya
evm.TU.supercontig_18.43
I
0.000
evm.TU.supercontig_538.1
Carica papaya
evm.TU.supercontig_538.1
I
0.000
gene21832-v1.0-hybrid
Fragaria vesca
gene21832-v1.0-hybrid
I
0.000
GLYMA02G01600
Glycine max
GLYMA02G01600
N
0.000
GLYMA03G37790
Glycine max
GLYMA03G37790
I
0.000
GLYMA10G01640
Glycine max
GLYMA10G01640
N
0.000
GLYMA11G12240
Glycine max
GLYMA11G12240
I
0.000
GLYMA12G04440
Glycine max
GLYMA12G04440
I
0.000
GLYMA19G40390
Glycine max
GLYMA19G40390
I
0.000
Gorai.001G144200
Gossypium raimondii
Gorai.001G144200
I
0.000
Gorai.007G122800
Gossypium raimondii
Gorai.007G122800
I
0.000
Gorai.008G065300
Gossypium raimondii
Gorai.008G065300
I
0.000
GSMUA_Achr10G12910_001
Musa acuminata
GSMUA_Achr10G12910_001
I
0.000
GSMUA_Achr11G05140_001
Musa acuminata
GSMUA_Achr11G05140_001
I
0.000
GSMUA_Achr11G20700_001
Musa acuminata
GSMUA_Achr11G20700_001
I
0.000
GSMUA_Achr1G12710_001
Musa acuminata
GSMUA_Achr1G12710_001
I
0.000
GSMUA_Achr2G06540_001
Musa acuminata
GSMUA_Achr2G06540_001
I
0.000
GSMUA_Achr4G03790_001
Musa acuminata
GSMUA_Achr4G03790_001
I
0.000
GSMUA_Achr8G29960_001
Musa acuminata
GSMUA_Achr8G29960_001
I
0.000
Lus10010005.g
Linum usitatissimum
Lus10010005.g
I
0.000
Lus10025024.g
Linum usitatissimum
Lus10025024.g
I
0.000
Lus10040428.g
Linum usitatissimum
Lus10040428.g
I
0.000
MDP0000205823
Malus domestica
MDP0000205823
I
0.000
MDP0000234798
Malus domestica
MDP0000234798
I
0.000
MDP0000239026
Malus domestica
MDP0000239026
I
0.000
MDP0000437680
Malus domestica
MDP0000437680
I
0.000
MDP0000949327
Malus domestica
MDP0000949327
I
0.000
mgf003466m
Mimulus guttatus
mgf003466m
I
0.000
mgf004063m
Mimulus guttatus
mgf004063m
N
0.000
mgf018581m
Mimulus guttatus
mgf018581m
I
0.000
MLOC_52125
Hordeum vulgare
MLOC_52125
N
0.000
MTR_1g087040
Medicago truncatula
MTR_1g087040
I
0.000
OB05G12090
Oryza brachyantha
OB05G12090
N
0.000
OBART05G02070
Oryza barthii
OBART05G02070
N
0.000
OGLUM05G02130
Oryza glumaepatula
OGLUM05G02130
N
0.000
OMERI05G02170
Oryza meridionalis
OMERI05G02170
N
0.000
OPUNC05G01750
Oryza punctata
OPUNC05G01750
N
0.000
orange1.1g032187m.g
Citrus sinensis
orange1.1g032187m.g
I
0.000
orange1.1g044691m.g
Citrus sinensis
orange1.1g044691m.g
I
0.000
ORGLA05G0020300
Oryza glaberrima
ORGLA05G0020300
N
0.000
ORUFI05G02170
Oryza rufipogon
ORUFI05G02170
N
0.000
OS05G0129300
Oryza sativa
OS05G0129300
N
0.000
PGSC0003DMG400022589
Solanum tuberosum
PGSC0003DMG400022589
I
0.000
PGSC0003DMG400030946
Solanum tuberosum
PGSC0003DMG400030946
I
0.000
PK03779.1
Cannabis sativa
PK03779.1
I
0.000
PK07533.1
Cannabis sativa
PK07533.1
I
0.000
POPTR_0002s19720
Populus trichocarpa
POPTR_0002s19720
I
0.000
POPTR_0004s16560
Populus trichocarpa
POPTR_0004s16560
I
0.000
POPTR_0009s12250
Populus trichocarpa
POPTR_0009s12250
I
0.000
POPTR_0014s11590
Populus trichocarpa
POPTR_0014s11590
I
0.000
PRUPE_ppa013046mg
Prunus persica
PRUPE_ppa013046mg
I
0.000
SapurV1A.0158s0220
Salix purpurea
SapurV1A.0158s0220
I
0.000
SapurV1A.0396s0080
Salix purpurea
SapurV1A.0396s0080
I
0.000
SapurV1A.3521s0020
Salix purpurea
SapurV1A.3521s0020
I
0.000
TCM_004807
Theobroma cacao
TCM_004807
I
0.000
Thhalv10006418m.g
Eutrema salsugineum
Thhalv10006418m.g
I
0.000
Traes_1AS_94B6230FB1
Triticum aestivum
Traes_1AS_94B6230FB1
N
0.000
Traes_1BS_A44C97E0F
Triticum aestivum
Traes_1BS_A44C97E0F
N
0.000
Traes_1DS_62FDD3493
Triticum aestivum
Traes_1DS_62FDD3493
N
0.000
VIT_03s0038g04450
Vitis vinifera
VIT_03s0038g04450
I
0.000