MTR_8g042410 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_8g042410 T274971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.858 0.880
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.841 0.870
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.841 0.870
MYB33
M02306_2.00 		Arabidopsis thaliana
HAACNRHHNN
NNDDYNGTTD		 PBM
Weirauch et al.(2014)
pTH8204 		0.828 0.848
MYB33
M07120_2.00 		Arabidopsis thaliana
NTAACYGWHWH
DWDWCRGTTAN		 Dap-seq
OMalley et al.(2016)
MYB33_col_a 		0.828 0.848
ATMYB65
M01076_2.00 		Arabidopsis thaliana
HAACNRHHN
NDDYNGTTD		 PBM
Sullivan et al.(2014)
pTH7084 		0.802 0.826
ATMYB65
M07076_2.00 		Arabidopsis thaliana
DHHNTAACBGHMW
WKDCVGTTANDDH		 Dap-seq
OMalley et al.(2016)
MYB65_col200_a 		0.802 0.826
ATMYB65
M07077_2.00 		Arabidopsis thaliana
NTAACYGHMWHNDHN
NDHNDWKDCRGTTAN		 Dap-seq
OMalley et al.(2016)
MYB65_colamp_a 		0.802 0.826
MYB101
M07051_2.00 		Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN		 Dap-seq
OMalley et al.(2016)
MYB101_col_a 		0.774 0.804
MYB101
M07052_2.00 		Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH		 Dap-seq
OMalley et al.(2016)
MYB101_colamp_a 		0.774 0.804
myb.Ph3
M02704_2.00 		Petunia x hybrida
WAACNGTYW
WRACNGTTW		 SELEX
Mathelier et al.(2014)
MA0054.1 		0.768 0.837
myb.Ph3
M11070_2.00 		Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY		 Transfac
Matys et al.(2006)
P$MYBPH3_01 		0.768 0.837
myb.Ph3
M11071_2.00 		Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS		 Transfac
Matys et al.(2006)
P$MYBPH3_02 		0.768 0.837
Q9FR42_TOBAC
M11076_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBAS1_01 		0.763 0.815
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH19184 Myb 39 86
KEH19184 Myb 92 136

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA008492 Oryza indica BGIOSGA008492 I
BGIOSGA016546 Oryza indica BGIOSGA016546 I
BGIOSGA023457 Oryza indica BGIOSGA023457 N
BGIOSGA026695 Oryza indica BGIOSGA026695 I
BRADI1G32660 Brachypodium distachyon BRADI1G32660 I
BRADI3G46900 Brachypodium distachyon BRADI3G46900 I
Cagra.6372s0006 Capsella grandiflora Cagra.6372s0006 N
Carubv10011081m.g Capsella rubella Carubv10011081m.g N
cassava27052.m1 Manihot esculenta cassava27052.m1 I
Ca_13537 Cicer arietinum Ca_13537 N
chr3.CM0279.430.nd Lotus japonicus chr3.CM0279.430.nd N
Eucgr.F01449 Eucalyptus grandis Eucgr.F01449 N
F775_20638 Aegilops tauschii F775_20638 I
F775_26920 Aegilops tauschii F775_26920 N
F775_30297 Aegilops tauschii F775_30297 I
GLYMA08G18470 Glycine max GLYMA08G18470 N
GLYMA15G40510 Glycine max GLYMA15G40510 N
GRMZM2G009892 Zea mays GRMZM2G009892 I
GRMZM2G063522 Zea mays GRMZM2G063522 I
GRMZM2G139700 Zea mays GRMZM2G139700 I
GRMZM2G167018 Zea mays GRMZM2G167018 I
GRMZM5G898290 Zea mays GRMZM5G898290 N
GSMUA_Achr3G23360_001 Musa acuminata GSMUA_Achr3G23360_001 N
GSMUA_Achr6G30050_001 Musa acuminata GSMUA_Achr6G30050_001 N
GSMUA_Achr9G10210_001 Musa acuminata GSMUA_Achr9G10210_001 N
LPERR02G17680 Leersia perrieri LPERR02G17680 N
LPERR04G11740 Leersia perrieri LPERR04G11740 I
LPERR08G17020 Leersia perrieri LPERR08G17020 I
MLOC_13932 Hordeum vulgare MLOC_13932 I
MLOC_25708 Hordeum vulgare MLOC_25708 N
MLOC_53744 Hordeum vulgare MLOC_53744 N
MLOC_65286 Hordeum vulgare MLOC_65286 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_2g064470 Medicago truncatula MTR_2g064470 N
OB02G29280 Oryza brachyantha OB02G29280 N
OBART02G21850 Oryza barthii OBART02G21850 I
OBART04G14970 Oryza barthii OBART04G14970 I
OBART04G25950 Oryza barthii OBART04G25950 N
OBART06G24550 Oryza barthii OBART06G24550 N
OGLUM02G22030 Oryza glumaepatula OGLUM02G22030 I
OGLUM04G14830 Oryza glumaepatula OGLUM04G14830 I
OGLUM06G25850 Oryza glumaepatula OGLUM06G25850 N
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I
OLONG_010248 Oryza longistaminata OLONG_010248 N
OLONG_023103 Oryza longistaminata OLONG_023103 I
OMERI02G21390 Oryza meridionalis OMERI02G21390 I
OMERI04G21180 Oryza meridionalis OMERI04G21180 N
OMERI06G24740 Oryza meridionalis OMERI06G24740 N
ONIVA02G24080 Oryza nivara ONIVA02G24080 I
ONIVA02G35380 Oryza nivara ONIVA02G35380 N
ONIVA04G13100 Oryza nivara ONIVA04G13100 I
ONIVA08G22710 Oryza nivara ONIVA08G22710 I
OPUNC06G22270 Oryza punctata OPUNC06G22270 N
OPUNC08G18240 Oryza punctata OPUNC08G18240 I
ORGLA04G0119700 Oryza glaberrima ORGLA04G0119700 I
ORGLA04G0226100 Oryza glaberrima ORGLA04G0226100 N
ORGLA06G0205600 Oryza glaberrima ORGLA06G0205600 N
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I
ORUFI02G22930 Oryza rufipogon ORUFI02G22930 I
ORUFI04G16370 Oryza rufipogon ORUFI04G16370 I
ORUFI06G26420 Oryza rufipogon ORUFI06G26420 N
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I
OS02G0579000 Oryza sativa OS02G0579000 I
OS04G0460600 Oryza sativa OS04G0460600 I
OS06G0675600 Oryza sativa OS06G0675600 N
OS08G0511200 Oryza sativa OS08G0511200 I
Pavir.Db00380 Panicum virgatum Pavir.Db00380 N
Pavir.Fb00532 Panicum virgatum Pavir.Fb00532 N
Pavir.Ga00022 Panicum virgatum Pavir.Ga00022 I
Pavir.Gb00488 Panicum virgatum Pavir.Gb00488 N
Pavir.Gb01850 Panicum virgatum Pavir.Gb01850 I
Pavir.J36955 Panicum virgatum Pavir.J36955 I
Sb06g019010 Sorghum bicolor Sb06g019010 I
Sb07g005610 Sorghum bicolor Sb07g005610 I
Sb10g027100 Sorghum bicolor Sb10g027100 N
SELMODRAFT_71307 Selaginella moellendorffii SELMODRAFT_71307 I
SELMODRAFT_86855 Selaginella moellendorffii SELMODRAFT_86855 I
Si006975m.g Setaria italica Si006975m.g N
Si010553m.g Setaria italica Si010553m.g I
Si010680m.g Setaria italica Si010680m.g I
Si014180m.g Setaria italica Si014180m.g N
Si017567m.g Setaria italica Si017567m.g N
Traes_2AL_CA89051FD Triticum aestivum Traes_2AL_CA89051FD N
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I
Traes_7AL_BE3253C8F Triticum aestivum Traes_7AL_BE3253C8F N
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I
TRIUR3_03895 Triticum urartu TRIUR3_03895 N
TRIUR3_29250 Triticum urartu TRIUR3_29250 I
TRIUR3_34020 Triticum urartu TRIUR3_34020 N