PGSC0003DMG400009342 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400009342 T277579_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400024168 Myb 174 222
PGSC0003DMT400024169 Myb 74 122

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29908.m006268 Ricinus communis 29908.m006268 N 0.697
AMTR_s00016p00255950 Amborella trichopoda AMTR_s00016p00255950 N 0.683
Aquca_007_00504 Aquilegia coerulea Aquca_007_00504 N 0.695
AT1G09710 Arabidopsis thaliana AT1G09710 N 0.703
Bostr.25494s0029 Boechera stricta Bostr.25494s0029 N 0.703
Cagra.4395s0155 Capsella grandiflora Cagra.4395s0155 N 0.703
Carubv10010985m.g Capsella rubella Carubv10010985m.g N 0.703
cassava31065.valid.m1 Manihot esculenta cassava31065.valid.m1 N 0.715
cassava4465.m1 Manihot esculenta cassava4465.m1 N 0.715
Ciclev10000622m.g Citrus clementina Ciclev10000622m.g N 0.695
Cla022491 Citrullus lanatus Cla022491 N 0.709
Cla023409 Citrullus lanatus Cla023409 N 0.684
Cucsa.160570 Cucumis sativus Cucsa.160570 N 0.699
Cucsa.311930 Cucumis sativus Cucsa.311930 N 0.777
Cucsa.311940 Cucumis sativus Cucsa.311940 N 0.777
Cucsa.311950 Cucumis sativus Cucsa.311950 N 0.777
Cucsa.311960 Cucumis sativus Cucsa.311960 N 0.777
Cucsa.311970 Cucumis sativus Cucsa.311970 N 0.777
Eucgr.F02154 Eucalyptus grandis Eucgr.F02154 N 0.754
evm.TU.supercontig_21.26 Carica papaya evm.TU.supercontig_21.26 N 0.706
fgenesh2_kg.1__1026__AT1G09710.1 Arabidopsis lyrata fgenesh2_kg.1__1026__AT1G09710.1 N 0.703
GSMUA_Achr6G12970_001 Musa acuminata GSMUA_Achr6G12970_001 N 0.670
Lus10028172.g Linum usitatissimum Lus10028172.g N 0.672
Lus10042871.g Linum usitatissimum Lus10042871.g N 0.672
MDP0000311848 Malus domestica MDP0000311848 N 0.680
orange1.1g007452m.g Citrus sinensis orange1.1g007452m.g N 0.695
PK00855.1 Cannabis sativa PK00855.1 N 0.764
Pm004407 Prunus mume Pm004407 N 0.714
POPTR_0002s10670 Populus trichocarpa POPTR_0002s10670 N 0.705
PRUPE_ppa1027142mg Prunus persica PRUPE_ppa1027142mg N 0.714
SapurV1A.0004s1050 Salix purpurea SapurV1A.0004s1050 N 0.705
SapurV1A.0320s0130 Salix purpurea SapurV1A.0320s0130 N 0.681
Solyc04g076360.2 Solanum lycopersicum Solyc04g076360.2 N 0.909
Solyc12g087970.1 Solanum lycopersicum Solyc12g087970.1 N 0.773
VIT_18s0001g07620 Vitis vinifera VIT_18s0001g07620 N 0.748