cassava13649.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava13649.valid.m1 T284007_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.909 0.978
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.909 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava13649.valid.m1 Myb 42 109

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_191645 Agaricus bisporus AGABI2DRAFT_191645 N 0.000
BN946_scf185043.g242 Trametes cinnabarina BN946_scf185043.g242 N 0.000
BOTBODRAFT_90657 Botryobasidium botryosum BOTBODRAFT_90657 N 0.000
CC1G_11400 Coprinopsis cinerea CC1G_11400 N 0.000
CERSUDRAFT_111715 Ceriporiopsis subvermispora CERSUDRAFT_111715 N 0.000
estExt_fgenesh3_kg.C_40392 Heterobasidion annosum estExt_fgenesh3_kg.C_40392 N 0.000
e_gwh2.2.1019.1 Phanerochaete chrysosporium e_gwh2.2.1019.1 N 0.000
FIBRA_06118 Fibroporia radiculosa FIBRA_06118 N 0.000
FOMPIDRAFT_1116461 Fomitopsis pinicola FOMPIDRAFT_1116461 N 0.000
GALMADRAFT_227586 Galerina marginata GALMADRAFT_227586 N 0.000
GLOTRDRAFT_119701 Gloeophyllum trabeum GLOTRDRAFT_119701 N 0.000
HelroG82753 Helobdella robusta HelroG82753 N 0.000
HETIRDRAFT_439181 Heterobasidion irregulare HETIRDRAFT_439181 N 0.000
JAAARDRAFT_96982 Jaapia argillacea JAAARDRAFT_96982 N 0.000
K443DRAFT_167654 Laccaria amethystina K443DRAFT_167654 N 0.000
LACBIDRAFT_294914 Laccaria bicolor LACBIDRAFT_294914 N 0.000
M378DRAFT_22958 Amanita muscaria M378DRAFT_22958 N 0.000
M407DRAFT_143647 Tulasnella calospora M407DRAFT_143647 N 0.000
M408DRAFT_53001 Serendipita vermifera M408DRAFT_53001 N 0.000
M408DRAFT_54305 Serendipita vermifera M408DRAFT_54305 N 0.000
MVLG_07162 Microbotryum violaceum MVLG_07162 I 0.000
PHACADRAFT_250106 Phanerochaete carnosa PHACADRAFT_250106 N 0.000
PHLGIDRAFT_91671 Phlebiopsis gigantea PHLGIDRAFT_91671 N 0.000
PIIN_07506 Piriformospora indica PIIN_07506 N 0.000
PILCRDRAFT_819051 Piloderma croceum PILCRDRAFT_819051 N 0.000
PLEOSDRAFT_1102853 Pleurotus ostreatus PLEOSDRAFT_1102853 N 0.000
POSPLDRAFT_104147 Postia placenta POSPLDRAFT_104147 N 0.000
SCHCODRAFT_62473 Schizophyllum commune SCHCODRAFT_62473 N 0.000
SERLA73DRAFT_131740 Serpula lacrymans SERLA73DRAFT_131740 I 0.000