e_gw1.46.242.1 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 e_gw1.46.242.1 T284629_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.46.242.1 Myb 13 60
e_gw1.46.242.1 Myb 66 111

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.720
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.693
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.662
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.738
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.675
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.665
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.669
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.688
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.699
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.680
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.698
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.729
e_gw1.141.66.1 Physcomitrella patens e_gw1.141.66.1 N 0.852
e_gw1.204.95.1 Physcomitrella patens e_gw1.204.95.1 N 0.883
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N 0.903
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.702
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.693
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.718
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.671
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.674
gw1.295.9.1 Physcomitrella patens gw1.295.9.1 N 0.827
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.680
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.688
MLOC_44167 Hordeum vulgare MLOC_44167 I 0.672
OB03G23760 Oryza brachyantha OB03G23760 I 0.679
OBART03G13840 Oryza barthii OBART03G13840 I 0.679
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.679
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.679
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.679
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.679
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.665
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.679
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.679
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.671
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.730
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.686
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.670
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.693
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.671
TCM_045715 Theobroma cacao TCM_045715 N 0.718
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I 0.672
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I 0.672
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.687