Carubv10015863m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10015863m.g T286352_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10015863m Myb 1044 1094

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30204.m001750 Ricinus communis 30204.m001750 N 0.745
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N 0.681
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N 0.689
Bo3g083740 Brassica oleracea Bo3g083740 N 0.768
Bo4g133290 Brassica oleracea Bo4g133290 N 0.676
Bo7g031610 Brassica oleracea Bo7g031610 N 0.759
Bostr.19424s0133 Boechera stricta Bostr.19424s0133 N 0.821
Bostr.2021s0055 Boechera stricta Bostr.2021s0055 N 0.747
Bra013238 Brassica rapa Bra013238 N 0.768
Bra032689 Brassica rapa Bra032689 N 0.676
Carubv10016123m.g Capsella rubella Carubv10016123m.g N 0.857
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N 0.798
chr1.LjT36F23.70.nd Lotus japonicus chr1.LjT36F23.70.nd N 0.776
Ciclev10018446m.g Citrus clementina Ciclev10018446m.g N 0.808
Cla015187 Citrullus lanatus Cla015187 N 0.810
Cucsa.078210 Cucumis sativus Cucsa.078210 N 0.810
EAF1A Arabidopsis thaliana AT3G24880 N 0.840
EAF1B Arabidopsis thaliana AT3G24870 N 0.840
Eucgr.H00795 Eucalyptus grandis Eucgr.H00795 N 0.772
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N 0.707
evm.TU.supercontig_8.144 Carica papaya evm.TU.supercontig_8.144 N 0.758
fgenesh2_kg.3__2706__AT3G24880.1 Arabidopsis lyrata fgenesh2_kg.3__2706__AT3G24880.1 N 0.862
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N 0.798
GLYMA03G18725 Glycine max GLYMA03G18725 N 0.745
GLYMA08G46710 Glycine max GLYMA08G46710 N 0.798
GLYMA16G14060 Glycine max GLYMA16G14060 N 0.745
GLYMA18G36628 Glycine max GLYMA18G36628 N 0.788
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N 0.767
Gorai.001G233800 Gossypium raimondii Gorai.001G233800 N 0.672
Gorai.004G226000 Gossypium raimondii Gorai.004G226000 N 0.785
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N 0.798
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N 0.679
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N 0.731
Lus10011850.g Linum usitatissimum Lus10011850.g N 0.767
Lus10022788.g Linum usitatissimum Lus10022788.g N 0.767
MDP0000155726 Malus domestica MDP0000155726 N 0.798
MDP0000250529 Malus domestica MDP0000250529 N 0.798
MTR_7g056603 Medicago truncatula MTR_7g056603 N 0.765
orange1.1g000147m.g Citrus sinensis orange1.1g000147m.g N 0.808
PDK_20s1355591g002 Phoenix dactylifera PDK_20s1355591g002 N 0.700
PK23540.1 Cannabis sativa PK23540.1 N 0.798
Pm020347 Prunus mume Pm020347 N 0.777
POPTR_0002s24490 Populus trichocarpa POPTR_0002s24490 N 0.776
POPTR_0014s19020 Populus trichocarpa POPTR_0014s19020 N 0.785
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N 0.777
SapurV1A.0135s0340 Salix purpurea SapurV1A.0135s0340 N 0.776
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N 0.798
Solyc06g083420.1 Solanum lycopersicum Solyc06g083420.1 N 0.777
Solyc09g060080.2 Solanum lycopersicum Solyc09g060080.2 N 0.749
TCM_002924 Theobroma cacao TCM_002924 N 0.765
Thhalv10002368m.g Eutrema salsugineum Thhalv10002368m.g N 0.800
VIT_07s0005g06680 Vitis vinifera VIT_07s0005g06680 N 0.675