Pavir.Ia03771 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ia03771 T289264_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.909 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.901 0.936
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.901 0.936
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.891 0.957
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.849 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia03771.1.p Myb 583 633

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000623 Aedes aegypti AAEL000623 I 0.000
AAEL000631 Aedes aegypti AAEL000631 I 0.000
AALB008012 Anopheles albimanus AALB008012 I 0.000
AALB008013 Anopheles albimanus AALB008013 I 0.000
Aan_R001550 Calypte anna Aan_R001550 I 0.000
AARA011979 Anopheles arabiensis AARA011979 I 0.000
AARA011980 Anopheles arabiensis AARA011980 I 0.000
AATE008476 Anopheles atroparvus AATE008476 I 0.000
AATE020589 Anopheles atroparvus AATE020589 I 0.000
ACEP23384 Atta cephalotes ACEP23384 I 0.000
ACHR001414 Anopheles christyi ACHR001414 I 0.000
ACHR004082 Anopheles christyi ACHR004082 I 0.000
ACOM031025 Anopheles coluzzii ACOM031025 I 0.000
ACOM031032 Anopheles coluzzii ACOM031032 I 0.000
ACUA009622 Anopheles culicifacies ACUA009622 I 0.000
ACUA018162 Anopheles culicifacies ACUA018162 I 0.000
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.000
ADAC002327 Anopheles darlingi ADAC002327 I 0.000
ADIR000710 Anopheles dirus ADIR000710 I 0.000
ADIR000711 Anopheles dirus ADIR000711 I 0.000
AEPI007160 Anopheles epiroticus AEPI007160 I 0.000
AEPI007161 Anopheles epiroticus AEPI007161 I 0.000
AFAF000663 Anopheles farauti AFAF000663 I 0.000
AFAF005680 Anopheles farauti AFAF005680 I 0.000
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.000
AFUN009836 Anopheles funestus AFUN009836 I 0.000
AFUN009837 Anopheles funestus AFUN009837 I 0.000
AGAP007782 Anopheles gambiae AGAP007782 I 0.000
AGAP007783 Anopheles gambiae AGAP007783 I 0.000
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.000
AMAM003661 Anopheles maculatus AMAM003661 I 0.000
AMAM005757 Anopheles maculatus AMAM005757 I 0.000
AMEC020313 Anopheles melas AMEC020313 I 0.000
AMEM005966 Anopheles merus AMEM005966 I 0.000
AMEM008520 Anopheles merus AMEM008520 I 0.000
AMIN006367 Anopheles minimus AMIN006367 I 0.000
AMIN006368 Anopheles minimus AMIN006368 I 0.000
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.000
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.000
ASIS002985 Anopheles sinensis ASIS002985 I 0.000
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.000
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.000
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.000
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.000
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.000
CapteG133139 Capitella teleta CapteG133139 I 0.000
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.000
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.000
CLEC013329 Cimex lectularius CLEC013329 I 0.000
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.000
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.000
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.000
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.000
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.000
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.000
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.000
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.000
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.000
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.000
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.000
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.000
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.000
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.000
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.000
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.000
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.000
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.000
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.000
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.000
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.000
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.000
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.000
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.000
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.000
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.000
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.000
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.000
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.000
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.000
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.000
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.000
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.000
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.000
GB45031 Apis mellifera GB45031 I 0.000
gcm Drosophila melanogaster FBgn0014179 D 0.000
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.000
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.000
GCM2 Bos taurus ENSBTAG00000018787 I 0.000
GCM2 Canis familiaris ENSCAFG00000009747 I 0.000
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.000
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.000
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.000
gcm2 Danio rerio ENSDARG00000045413 I 0.000
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.000
GCM2 Equus caballus ENSECAG00000017632 I 0.000
GCM2 Echinops telfairi ENSETEG00000012473 I 0.000
GCM2 Felis catus ENSFCAG00000001608 I 0.000
GCM2 Homo sapiens ENSG00000124827 D 0.000
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.000
GCM2 Gallus gallus ENSGALG00000012768 I 0.000
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.000
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.000
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.000
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.000
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.000
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.000
Gcm2 Mus musculus ENSMUSG00000021362 I 0.000
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.000
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.000
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.000
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.000
gcm2 Oryzias latipes ENSORLG00000019715 I 0.000
GCM2 Procavia capensis ENSPCAG00000011887 I 0.000
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.000
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.000
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.000
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.000
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.000
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.000
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.000
gcm2 Drosophila melanogaster FBgn0019809 D 0.000
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.000
gcm2.S Xenopus laevis XB-GENE-866131 I 0.000
GD22349 Drosophila simulans FBgn0193756 I 0.000
GE10457 Drosophila yakuba FBgn0228318 I 0.000
GE18856 Drosophila yakuba FBgn0236239 I 0.000
GF21907 Drosophila ananassae FBgn0098907 I 0.000
GF22779 Drosophila ananassae FBgn0099773 I 0.000
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.000
GG10041 Drosophila erecta FBgn0102353 I 0.000
GG24019 Drosophila erecta FBgn0116158 I 0.000
GH10675 Drosophila grimshawi FBgn0118156 I 0.000
GH11056 Drosophila grimshawi FBgn0118537 I 0.000
GI11073 Drosophila mojavensis FBgn0133835 I 0.000
GI17574 Drosophila mojavensis FBgn0140318 I 0.000
GJ17916 Drosophila virilis FBgn0205084 I 0.000
GJ18313 Drosophila virilis FBgn0205472 I 0.000
GK23810 Drosophila willistoni FBgn0225772 I 0.000
GK23867 Drosophila willistoni FBgn0225829 I 0.000
GL18919 Drosophila persimilis FBgn0156520 I 0.000
GL19218 Drosophila persimilis FBgn0156817 I 0.000
GM12386 Drosophila sechellia FBgn0167323 I 0.000
GM17569 Drosophila sechellia FBgn0172477 I 0.000
HMEL005671 Heliconius melpomene HMEL005671 I 0.000
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.000
ISCW022914 Ixodes scapularis ISCW022914 I 0.000
KGM_05743 Danaus plexippus KGM_05743 I 0.000
L798_07938 Zootermopsis nevadensis L798_07938 I 0.000
LCUP008083 Lucilia cuprina LCUP008083 I 0.000
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.000
LotgiG112320 Lottia gigantea LotgiG112320 I 0.000
MCINX011946 Melitaea cinxia MCINX011946 I 0.000
MDOA003644 Musca domestica MDOA003644 I 0.000
MDOA004732 Musca domestica MDOA004732 I 0.000
NV17454 Nasonia vitripennis NV17454 I 0.000
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.000
PHUM436840 Pediculus humanus PHUM436840 I 0.000
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.000
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.000
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.000
RPRC001299 Rhodnius prolixus RPRC001299 I 0.000
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.000
SINV21711 Solenopsis invicta SINV21711 I 0.000
TC014730 Tribolium castaneum TC014730 I 0.000
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.000
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.000