YQE_03062 (Dendroctonus ponderosae)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 YQE_03062 T198151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.743 0.743
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.743 0.743
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.743 0.743
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.743 0.743
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.736 0.736
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.736 0.736
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.736 0.736
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.686 0.686
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.686 0.686
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.686 0.686
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.686 0.686
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.671 0.671
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.664 0.664
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.664 0.664
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.614 0.614
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.614 0.614
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.614 0.614
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.614 0.614
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN80523 GCM 30 169

Links

Other GCM family TFs
Other Dendroctonus ponderosae TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TC014730 Tribolium castaneum TC014730 I 0.957
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.957
L798_07938 Zootermopsis nevadensis L798_07938 I 0.900
CLEC013329 Cimex lectularius CLEC013329 I 0.886
SMAR010130 Strigamia maritima SMAR010130 I 0.881
PHUM436840 Pediculus humanus PHUM436840 I 0.879
RPRC001299 Rhodnius prolixus RPRC001299 I 0.871
GB45031 Apis mellifera GB45031 I 0.864
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.857
ACEP23384 Atta cephalotes ACEP23384 I 0.857
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.850
SINV21711 Solenopsis invicta SINV21711 I 0.850
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.850
NV17454 Nasonia vitripennis NV17454 I 0.850
ISCW022914 Ixodes scapularis ISCW022914 I 0.836
AEPI007160 Anopheles epiroticus AEPI007160 I 0.836
AFUN009837 Anopheles funestus AFUN009837 I 0.829
KGM_05743 Danaus plexippus KGM_05743 I 0.829
AMAM003661 Anopheles maculatus AMAM003661 I 0.829
ACHR001414 Anopheles christyi ACHR001414 I 0.829
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.829
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.829
AMIN006368 Anopheles minimus AMIN006368 I 0.829
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.829
AGAP007783 Anopheles gambiae AGAP007783 I 0.821
AATE008476 Anopheles atroparvus AATE008476 I 0.821
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.821
ACUA009622 Anopheles culicifacies ACUA009622 I 0.821
ASIS002985 Anopheles sinensis ASIS002985 I 0.821
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.814
MCINX011946 Melitaea cinxia MCINX011946 I 0.814
HMEL005671 Heliconius melpomene HMEL005671 I 0.814
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.814
AARA011980 Anopheles arabiensis AARA011980 I 0.814
ADIR000711 Anopheles dirus ADIR000711 I 0.814
AFAF005680 Anopheles farauti AFAF005680 I 0.807
AALB008013 Anopheles albimanus AALB008013 I 0.807
ADAC002327 Anopheles darlingi ADAC002327 I 0.807
ACOM031025 Anopheles coluzzii ACOM031025 I 0.805
AMEM005966 Anopheles merus AMEM005966 I 0.805
AMEC020313 Anopheles melas AMEC020313 I 0.800
AAEL000623 Aedes aegypti AAEL000623 I 0.793
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.793
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.793
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.771
MDOA004732 Musca domestica MDOA004732 I 0.771
GI11073 Drosophila mojavensis FBgn0133835 I 0.757
MDOA003644 Musca domestica MDOA003644 I 0.757
GJ18313 Drosophila virilis FBgn0205472 I 0.757
GF21907 Drosophila ananassae FBgn0098907 I 0.757
HHAL003300-PA Halyomorpha halys HHAL003300-PA N 0.753
GI17574 Drosophila mojavensis FBgn0140318 I 0.750
GJ17916 Drosophila virilis FBgn0205084 I 0.750
GK23810 Drosophila willistoni FBgn0225772 I 0.750
GL19218 Drosophila persimilis FBgn0156817 I 0.750
GH10675 Drosophila grimshawi FBgn0118156 I 0.750
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.750
GG24019 Drosophila erecta FBgn0116158 I 0.743
AALB008012 Anopheles albimanus AALB008012 I 0.743
AMAM005757 Anopheles maculatus AMAM005757 I 0.743
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.743
GM12386 Drosophila sechellia FBgn0167323 I 0.743
gcm Drosophila melanogaster FBgn0014179 D 0.743
GE10457 Drosophila yakuba FBgn0228318 I 0.743
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.736
GF22779 Drosophila ananassae FBgn0099773 I 0.736
LCUP008083 Lucilia cuprina LCUP008083 I 0.736
GM17569 Drosophila sechellia FBgn0172477 I 0.736
GH11056 Drosophila grimshawi FBgn0118537 I 0.736
GG10041 Drosophila erecta FBgn0102353 I 0.736
gcm2 Drosophila melanogaster FBgn0019809 D 0.736
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.736
CapteG133139 Capitella teleta CapteG133139 I 0.735
GL18919 Drosophila persimilis FBgn0156520 I 0.729
GE18856 Drosophila yakuba FBgn0236239 I 0.729
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.729
AAEL000631 Aedes aegypti AAEL000631 I 0.721
GD22349 Drosophila simulans FBgn0193756 I 0.721
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.714
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.714
AATE020589 Anopheles atroparvus AATE020589 I 0.714
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.710
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.710
gw.285.88.1 Branchiostoma floridae gw.285.88.1 I 0.708
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.707
ASIS021139 Anopheles sinensis ASIS021139 I 0.707
AFAF000663 Anopheles farauti AFAF000663 I 0.707
ACOM031032 Anopheles coluzzii ACOM031032 I 0.707
AARA011979 Anopheles arabiensis AARA011979 I 0.707
ADIR000710 Anopheles dirus ADIR000710 I 0.707
AEPI007161 Anopheles epiroticus AEPI007161 I 0.707
LotgiG112320 Lottia gigantea LotgiG112320 I 0.707
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.707
AMEM008520 Anopheles merus AMEM008520 I 0.707
GK23867 Drosophila willistoni FBgn0225829 I 0.707
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.707
AGAP007782 Anopheles gambiae AGAP007782 I 0.707
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.703
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.703
GCM2 Canis familiaris ENSCAFG00000009747 I 0.703
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.696
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.696
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.696
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.696
GCM2 Homo sapiens ENSG00000124827 D 0.696
GCM2 Procavia capensis ENSPCAG00000011887 I 0.696
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.696
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.696
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.696
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.696
GCM2 Bos taurus ENSBTAG00000018787 I 0.696
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.696
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.696
ACUA018162 Anopheles culicifacies ACUA018162 I 0.693
AMIN006367 Anopheles minimus AMIN006367 I 0.693
AFUN009836 Anopheles funestus AFUN009836 I 0.693
ACHR004082 Anopheles christyi ACHR004082 I 0.693
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.693
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.688
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.688
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.688
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.688
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.688
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.688
gcm2 Oryzias latipes ENSORLG00000019715 I 0.688
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.688
gcm2.S Xenopus laevis XB-GENE-866131 I 0.688
GCM2 Equus caballus ENSECAG00000017632 I 0.686
GCM2 Felis catus ENSFCAG00000001608 I 0.686
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.686
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.686
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.686
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.686
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.686
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.681
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.681
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.681
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.681
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.681
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.681
gcm2 Danio rerio ENSDARG00000045413 I 0.681
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.679
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.679
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.679
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.679
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.679
GCM2 Echinops telfairi ENSETEG00000012473 I 0.678
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.674
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.674
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.674
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.674
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.671
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.671
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.671
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.671
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.671
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.667
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.667
Gcm2 Mus musculus ENSMUSG00000021362 I 0.667
Aan_R001550 Calypte anna Aan_R001550 I 0.667
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.667
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.664
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.664
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.664
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.664
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.664
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.661
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.659
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.659
GCM2 Gallus gallus ENSGALG00000012768 I 0.657
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.657
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.647
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.645
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.638
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.630
Tal_R009935 Tyto alba Tal_R009935 I 0.630
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.628
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.628
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.623
Gcm1 Mus musculus ENSMUSG00000023333 D 0.623
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.623
GCM1 Gallus gallus ENSGALG00000016316 I 0.623
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.623
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.623
SPER_0002793601 Spirometra erinaceieuropaei SPER_0002793601 N 0.622
Aan_R001196 Calypte anna Aan_R001196 I 0.621
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.621
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.621
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.616
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.616
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.616
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.616
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.616
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.616
GCM1 Bos taurus ENSBTAG00000008148 I 0.616
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.616
TsM_000040500 Taenia solium TsM_000040500 N 0.614
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.614
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.614
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.614
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.614
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.614
GCM1 Ochotona princeps ENSOPRG00000003290 I 0.610
GCM1 Canis familiaris ENSCAFG00000002273 I 0.609
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.609
GCM1 Equus caballus ENSECAG00000014228 I 0.609
GCM1 Felis catus ENSFCAG00000009490 I 0.609
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.609
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.609
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.609