Thhalv10024320m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10024320m.g T290138_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.829 0.940
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.829 0.940
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.765 0.843
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.742 0.828
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.718 0.806
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.675 0.716
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10024320m Myb 4 45
Thhalv10024320m Myb 51 97
Thhalv10024320m Myb 103 147

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EuGene15000120 Heterobasidion annosum EuGene15000120 N 0.000
EuGene3001157 Heterobasidion annosum EuGene3001157 N 0.000
fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
HETIRDRAFT_144838 Heterobasidion irregulare HETIRDRAFT_144838 N 0.000
HETIRDRAFT_165304 Heterobasidion irregulare HETIRDRAFT_165304 N 0.000
HETIRDRAFT_316533 Heterobasidion irregulare HETIRDRAFT_316533 N 0.000
HETIRDRAFT_316690 Heterobasidion irregulare HETIRDRAFT_316690 N 0.000
HETIRDRAFT_412619 Heterobasidion irregulare HETIRDRAFT_412619 N 0.000
HETIRDRAFT_419047 Heterobasidion irregulare HETIRDRAFT_419047 N 0.000
HETIRDRAFT_440636 Heterobasidion irregulare HETIRDRAFT_440636 N 0.000
Moror_495 Moniliophthora roreri Moror_495 N 0.000