PK23540.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK23540.1 T290466_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK23540.1 Myb 1146 1196

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30204.m001750 Ricinus communis 30204.m001750 N 0.815
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N 0.751
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N 0.759
BGIOSGA027556 Oryza indica BGIOSGA027556 N 0.708
Bo3g083740 Brassica oleracea Bo3g083740 N 0.791
Bo4g133290 Brassica oleracea Bo4g133290 N 0.712
Bo7g031610 Brassica oleracea Bo7g031610 N 0.802
Bostr.19424s0133 Boechera stricta Bostr.19424s0133 N 0.845
Bostr.2021s0055 Boechera stricta Bostr.2021s0055 N 0.770
Bra013238 Brassica rapa Bra013238 N 0.791
Bra032689 Brassica rapa Bra032689 N 0.712
BRADI2G14372 Brachypodium distachyon BRADI2G14372 N 0.667
BRADI2G41720 Brachypodium distachyon BRADI2G41720 N 0.674
Carubv10015863m.g Capsella rubella Carubv10015863m.g N 0.798
Carubv10016123m.g Capsella rubella Carubv10016123m.g N 0.746
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N 0.868
chr1.LjT36F23.70.nd Lotus japonicus chr1.LjT36F23.70.nd N 0.846
Ciclev10018446m.g Citrus clementina Ciclev10018446m.g N 0.858
Cla015187 Citrullus lanatus Cla015187 N 0.857
Cucsa.078210 Cucumis sativus Cucsa.078210 N 0.857
EAF1A Arabidopsis thaliana AT3G24880 N 0.823
EAF1B Arabidopsis thaliana AT3G24870 N 0.823
Eucgr.H00795 Eucalyptus grandis Eucgr.H00795 N 0.842
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N 0.777
evm.TU.supercontig_8.144 Carica papaya evm.TU.supercontig_8.144 N 0.828
F775_03250 Aegilops tauschii F775_03250 N 0.674
fgenesh1_pg.scaffold_87000060 Physcomitrella patens fgenesh1_pg.scaffold_87000060 N 0.687
fgenesh2_kg.3__2706__AT3G24880.1 Arabidopsis lyrata fgenesh2_kg.3__2706__AT3G24880.1 N 0.845
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N 0.868
GLYMA03G18725 Glycine max GLYMA03G18725 N 0.815
GLYMA08G46710 Glycine max GLYMA08G46710 N 0.868
GLYMA16G14060 Glycine max GLYMA16G14060 N 0.815
GLYMA18G36628 Glycine max GLYMA18G36628 N 0.858
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N 0.837
Gorai.001G233800 Gossypium raimondii Gorai.001G233800 N 0.742
Gorai.004G226000 Gossypium raimondii Gorai.004G226000 N 0.896
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N 0.868
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N 0.749
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N 0.801
LPERR11G18970 Leersia perrieri LPERR11G18970 N 0.674
Lus10011850.g Linum usitatissimum Lus10011850.g N 0.835
Lus10022788.g Linum usitatissimum Lus10022788.g N 0.835
MDP0000155726 Malus domestica MDP0000155726 N 0.868
MDP0000250529 Malus domestica MDP0000250529 N 0.868
MTR_7g056603 Medicago truncatula MTR_7g056603 N 0.826
OB01G30180 Oryza brachyantha OB01G30180 N 0.708
OBART08G04660 Oryza barthii OBART08G04660 N 0.708
OGLUM08G04910 Oryza glumaepatula OGLUM08G04910 N 0.708
OLONG_015531 Oryza longistaminata OLONG_015531 N 0.708
OMERI08G04670 Oryza meridionalis OMERI08G04670 N 0.708
ONIVA08G04510 Oryza nivara ONIVA08G04510 N 0.708
OPUNC08G04510 Oryza punctata OPUNC08G04510 N 0.708
orange1.1g000147m.g Citrus sinensis orange1.1g000147m.g N 0.858
ORUFI08G05170 Oryza rufipogon ORUFI08G05170 N 0.708
OS08G0177300 Oryza sativa OS08G0177300 N 0.708
Pavir.J18859 Panicum virgatum Pavir.J18859 N 0.730
PDK_20s1355591g002 Phoenix dactylifera PDK_20s1355591g002 N 0.748
Pm020347 Prunus mume Pm020347 N 0.845
POPTR_0002s24490 Populus trichocarpa POPTR_0002s24490 N 0.846
POPTR_0014s19020 Populus trichocarpa POPTR_0014s19020 N 0.855
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N 0.845
SapurV1A.0135s0340 Salix purpurea SapurV1A.0135s0340 N 0.846
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N 0.868
Sb03g025920 Sorghum bicolor Sb03g025920 N 0.730
Si000015m.g Setaria italica Si000015m.g N 0.730
Solyc06g083420.1 Solanum lycopersicum Solyc06g083420.1 N 0.865
Solyc09g060080.2 Solanum lycopersicum Solyc09g060080.2 N 0.786
TCM_002924 Theobroma cacao TCM_002924 N 0.835
Thhalv10002368m.g Eutrema salsugineum Thhalv10002368m.g N 0.824
Traes_3AL_06889C77D Triticum aestivum Traes_3AL_06889C77D N 0.667
Traes_3DL_FC1A52B36 Triticum aestivum Traes_3DL_FC1A52B36 N 0.667
TRIUR3_27363 Triticum urartu TRIUR3_27363 N 0.674
VIT_07s0005g06680 Vitis vinifera VIT_07s0005g06680 N 0.745