PDK_20s1414244g001 (Phoenix dactylifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PDK_20s1414244g001 T291134_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.909 0.978
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.881 0.913
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.881 0.913
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.863 0.913
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.863 0.913
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.790 0.804
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.790 0.804
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.790 0.804
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.790 0.804
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.790 0.804
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.777 0.870
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.777 0.870
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.777 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.775 0.848
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1414244g001 Myb 24 69

Links

Other Myb/SANT family TFs
Other Phoenix dactylifera TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29940.m000398 Ricinus communis 29940.m000398 I
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I
BGIOSGA018059 Oryza indica BGIOSGA018059 I
BGIOSGA026248 Oryza indica BGIOSGA026248 I
Bo4g012880 Brassica oleracea Bo4g012880 I
Bo4g190610 Brassica oleracea Bo4g190610 I
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I
Bra016959 Brassica rapa Bra016959 I
BRADI1G19702 Brachypodium distachyon BRADI1G19702 I
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I
BZIP17 Arabidopsis thaliana AT2G40950 D
BZIP17 Arabidopsis lyrata scaffold_402899.1 I
BZIP39 Oryza sativa OS05G0411300 I
BZIP49 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001722 I
BZIP49 Arabidopsis thaliana AT3G56660 I
BZIP60 Oryza sativa OS07G0644100 I
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I
Carubv10022722m.g Capsella rubella Carubv10022722m.g I
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I
Ca_08103 Cicer arietinum Ca_08103 I
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I
Cla017717 Citrullus lanatus Cla017717 I
Cucsa.337510 Cucumis sativus Cucsa.337510 I
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I
e_gw1.25.198.1 Physcomitrella patens e_gw1.25.198.1 I
F775_09858 Aegilops tauschii F775_09858 I
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I
GLYMA03G27865 Glycine max GLYMA03G27865 I
GLYMA19G30681 Glycine max GLYMA19G30681 I
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I
GRMZM2G045236 Zea mays GRMZM2G045236 I
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I
gw1.158.68.1 Physcomitrella patens gw1.158.68.1 I
LPERR05G13000 Leersia perrieri LPERR05G13000 I
LPERR07G21050 Leersia perrieri LPERR07G21050 I
Lus10010440.g Linum usitatissimum Lus10010440.g I
Lus10012104.g Linum usitatissimum Lus10012104.g I
Lus10027290.g Linum usitatissimum Lus10027290.g I
Lus10038995.g Linum usitatissimum Lus10038995.g I
MDP0000138811 Malus domestica MDP0000138811 I
MDP0000180785 Malus domestica MDP0000180785 I
MDP0000270677 Malus domestica MDP0000270677 I
MDP0000299504 Malus domestica MDP0000299504 I
mgf002378m Mimulus guttatus mgf002378m I
mgf013640m Mimulus guttatus mgf013640m I
MLOC_58500 Hordeum vulgare MLOC_58500 I
MTR_7g088890 Medicago truncatula MTR_7g088890 I
OB05G24300 Oryza brachyantha OB05G24300 I
OB07G29670 Oryza brachyantha OB07G29670 I
OBART07G24080 Oryza barthii OBART07G24080 I
OGLUM05G17320 Oryza glumaepatula OGLUM05G17320 I
OGLUM07G24220 Oryza glumaepatula OGLUM07G24220 I
OLONG_012651 Oryza longistaminata OLONG_012651 I
OMERI07G20490 Oryza meridionalis OMERI07G20490 I
ONIVA05G17010 Oryza nivara ONIVA05G17010 I
ONIVA07G23980 Oryza nivara ONIVA07G23980 I
OPUNC05G14460 Oryza punctata OPUNC05G14460 I
OPUNC07G22690 Oryza punctata OPUNC07G22690 I
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I
ORGLA05G0141100 Oryza glaberrima ORGLA05G0141100 I
ORGLA07G0187400 Oryza glaberrima ORGLA07G0187400 I
ORUFI05G17550 Oryza rufipogon ORUFI05G17550 I
ORUFI07G25260 Oryza rufipogon ORUFI07G25260 I
Pavir.Ba00049 Panicum virgatum Pavir.Ba00049 I
Pavir.J00385 Panicum virgatum Pavir.J00385 I
Pavir.J09096 Panicum virgatum Pavir.J09096 I
Pavir.J18543 Panicum virgatum Pavir.J18543 I
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I
PK07115.1 Cannabis sativa PK07115.1 I
Pm016493 Prunus mume Pm016493 I
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I
Sb02g041070 Sorghum bicolor Sb02g041070 I
Sb09g020320 Sorghum bicolor Sb09g020320 I
Si021442m.g Setaria italica Si021442m.g I
Si029351m.g Setaria italica Si029351m.g I
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I
TCM_023889 Theobroma cacao TCM_023889 I
TGA1B_TOBAC Nicotiana tabacum TGA1B_TOBAC D
Thhalv10005827m.g Eutrema salsugineum Thhalv10005827m.g I
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I
Traes_2BS_169BEF991 Triticum aestivum Traes_2BS_169BEF991 I
Traes_2DS_5FA136FBB Triticum aestivum Traes_2DS_5FA136FBB I
TRIUR3_00571 Triticum urartu TRIUR3_00571 I
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I