Bra001366 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra001366 T292510_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.944 0.895
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.944 0.895
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001366.1-P NAC/NAM 28 154

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28859.m000324 Ricinus communis 28859.m000324 N 0.000
29758.m000681 Ricinus communis 29758.m000681 N 0.000
Bo2g152930 Brassica oleracea Bo2g152930 N 0.000
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.000
Bra020611 Brassica rapa Bra020611 N 0.000
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 0.000
Carubv10000250m.g Capsella rubella Carubv10000250m.g N 0.000
cassava40276.m1 Manihot esculenta cassava40276.m1 N 0.000
cassava40936.m1 Manihot esculenta cassava40936.m1 N 0.000
Ca_07896 Cicer arietinum Ca_07896 N 0.000
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 0.000
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 0.000
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.000
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.000
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.000
FRS10 Vitis vinifera VIT_12s0057g00960 N 0.000
FRS10 Arabidopsis thaliana AT5G28530 N 0.000
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.000
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N 0.000
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N 0.000
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.000
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N 0.000
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.000
MDP0000249284 Malus domestica MDP0000249284 N 0.000
mgf004308m Mimulus guttatus mgf004308m N 0.000
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N 0.000
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N 0.000
PK07950.1 Cannabis sativa PK07950.1 N 0.000
PK09224.1 Cannabis sativa PK09224.1 N 0.000
Pm015052 Prunus mume Pm015052 N 0.000
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.000
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.000
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.000
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.000
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.000
TCM_020251 Theobroma cacao TCM_020251 N 0.000
TCM_030416 Theobroma cacao TCM_030416 N 0.000
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.000
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.000