cassava40276.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava40276.m1 T181056_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava40276.m1 FAR1 58 150

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N 0.989
TCM_020251 Theobroma cacao TCM_020251 N 0.989
FRS10 Vitis vinifera VIT_12s0057g00960 N 0.989
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 0.989
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N 0.989
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.978
Pm015052 Prunus mume Pm015052 N 0.978
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N 0.978
PK09224.1 Cannabis sativa PK09224.1 N 0.978
28859.m000324 Ricinus communis 28859.m000324 N 0.966
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N 0.966
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.955
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.955
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.955
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.944
mgf004308m Mimulus guttatus mgf004308m N 0.921
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.921
FRS10 Arabidopsis thaliana AT5G28530 N 0.910
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 0.910
Carubv10000250m.g Capsella rubella Carubv10000250m.g N 0.910
Bo2g152930 Brassica oleracea Bo2g152930 N 0.899
Bra020611 Brassica rapa Bra020611 N 0.843
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.787
TCM_030416 Theobroma cacao TCM_030416 N 0.787
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.787
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.787
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.775
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.775
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.775
29758.m000681 Ricinus communis 29758.m000681 N 0.775
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.775
Ca_07896 Cicer arietinum Ca_07896 N 0.764
cassava40936.m1 Manihot esculenta cassava40936.m1 N 0.764
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.764
MDP0000249284 Malus domestica MDP0000249284 N 0.764
PK07950.1 Cannabis sativa PK07950.1 N 0.764
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 0.753
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N 0.753
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N 0.742