CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra009379
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra009379
T292563_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra009379.1-P
NAC/NAM
7
133
APGFRFHPTDVELVRYYLKRKVLGKKLLVDAIAELDIYKFEPSDLPDKSYIKSGDLKWHFFCPREKKYATGVRANRATECGYWKTTGKERAVLCNGESVGKIKTLVYHVGKSPRGERTDWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.879
Bo2g009300
Brassica oleracea
Bo2g009300
I
0.939
Bo3g005150
Brassica oleracea
Bo3g005150
N
0.965
Bo3g101690
Brassica oleracea
Bo3g101690
I
0.882
Bo9g174090
Brassica oleracea
Bo9g174090
N
0.955
Bostr.13129s0062
Boechera stricta
Bostr.13129s0062
N
0.933
Bra006019
Brassica rapa
Bra006019
N
0.929
Bra024263
Brassica rapa
Bra024263
I
0.882
Bra028640
Brassica rapa
Bra028640
I
0.930
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
0.945
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
0.945
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.903
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.903
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.903
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
0.873
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
0.873
LjSGA_024981.1
Lotus japonicus
LjSGA_024981.1
N
0.873
NAC082
Arabidopsis thaliana
AT5G09330
N
0.937
Thhalv10004501m.g
Eutrema salsugineum
Thhalv10004501m.g
I
0.891
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N
0.945
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
0.940