CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28629.m000575
(
Ricinus communis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
28629.m000575
T296731_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28629.m000575
NAC/NAM
5
138
PPGFRFYPTEEELVSFYLHNKLDGRREDLNRVMDRIIPVLDIYDYNPWDLPQFAGDLSSRDPEQWFFFIPRQESEARGGRPKRLTTCGYWKATGSPGQVYSNNRSIGMKRTMVFYNGRAPNGRKTDWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Ricinus communis
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.892
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.880
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.905
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
0.983
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.915
cassava19207.valid.m1
Manihot esculenta
cassava19207.valid.m1
N
0.986
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.935
Ciclev10012468m.g
Citrus clementina
Ciclev10012468m.g
N
0.987
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.887
Cla018691
Citrullus lanatus
Cla018691
N
0.903
Cla018692
Citrullus lanatus
Cla018692
N
0.968
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.895
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.893
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.886
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.908
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.883
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
0.887
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.903
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.978
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.908
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.923
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.912
Gorai.009G399900
Gossypium raimondii
Gorai.009G399900
N
0.976
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.884
LjSGA_014778.2
Lotus japonicus
LjSGA_014778.2
N
0.873
MDP0000130797
Malus domestica
MDP0000130797
N
0.894
MDP0000252435
Malus domestica
MDP0000252435
N
0.935
MDP0000252746
Malus domestica
MDP0000252746
N
0.887
MDP0000506233
Malus domestica
MDP0000506233
N
0.909
MDP0000759504
Malus domestica
MDP0000759504
N
0.894
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.891
orange1.1g039532m.g
Citrus sinensis
orange1.1g039532m.g
N
0.987
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.891
PK27925.1
Cannabis sativa
PK27925.1
N
0.903
PK29014.1
Cannabis sativa
PK29014.1
N
0.904
Pm001403
Prunus mume
Pm001403
N
0.890
POPTR_0006s22580
Populus trichocarpa
POPTR_0006s22580
N
0.988
POPTR_0016s07680
Populus trichocarpa
POPTR_0016s07680
N
0.984
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.915
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.890
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.990
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
0.899
SapurV1A.0768s0010
Salix purpurea
SapurV1A.0768s0010
N
0.977
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
0.911
Si002586m.g
Setaria italica
Si002586m.g
N
0.871
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.888
TCM_022676
Theobroma cacao
TCM_022676
N
0.990
TCM_022690
Theobroma cacao
TCM_022690
N
0.984
VIT_08s0007g02940
Vitis vinifera
VIT_08s0007g02940
N
0.983