CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G083500
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.009G083500
T298135_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G083500.1
NAC/NAM
20
145
FPGFRFSPTDVELISYYLTKKLEGYEKCVEVIPEIEICRYEPWDLPDKSVIKSDNEWFFFCARGRKYPNGSQSRRATEQGYWKATGKERNVKSGSNVIGTKRTLVFHTGRAPKGERTEWIMHEYCM
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30055.m001612
Ricinus communis
30055.m001612
N
0.986
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.916
AMTR_s00082p00116910
Amborella trichopoda
AMTR_s00082p00116910
N
0.883
ANAC040
Arabidopsis lyrata
fgenesh2_kg.4__689__AT2G27300.1
I
0.934
anac060
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000902
N
0.981
anac089
Arabidopsis lyrata
scaffold_602275.1
N
0.969
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.883
Bo1g063720
Brassica oleracea
Bo1g063720
N
0.982
Bo2g023820
Brassica oleracea
Bo2g023820
N
0.975
Bo3g016820
Brassica oleracea
Bo3g016820
I
0.976
Bostr.0556s0726
Boechera stricta
Bostr.0556s0726
N
0.971
Bostr.26527s0049
Boechera stricta
Bostr.26527s0049
N
0.969
Bra002403
Brassica rapa
Bra002403
N
0.974
Bra006619
Brassica rapa
Bra006619
I
0.976
Bra020182
Brassica rapa
Bra020182
N
0.975
Bra021471
Brassica rapa
Bra021471
N
0.979
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.899
Cagra.0846s0004
Capsella grandiflora
Cagra.0846s0004
N
0.969
Carubv10001357m.g
Capsella rubella
Carubv10001357m.g
N
0.969
Carubv10019187m.g
Capsella rubella
Carubv10019187m.g
N
0.982
cassava16016.m1
Manihot esculenta
cassava16016.m1
N
0.989
Ca_20988
Cicer arietinum
Ca_20988
I
0.908
Ca_27204
Cicer arietinum
Ca_27204
I
0.879
Ciclev10028618m.g
Citrus clementina
Ciclev10028618m.g
N
0.991
Eucgr.B03823
Eucalyptus grandis
Eucgr.B03823
N
0.959
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.982
evm.TU.supercontig_195.35
Carica papaya
evm.TU.supercontig_195.35
N
0.981
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.916
F775_30082
Aegilops tauschii
F775_30082
I
0.900
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.981
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.976
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.891
Gorai.006G113700
Gossypium raimondii
Gorai.006G113700
N
0.994
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.872
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.913
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.901
GSMUA_Achr1G03560_001
Musa acuminata
GSMUA_Achr1G03560_001
I
0.901
GSMUA_Achr2G11810_001
Musa acuminata
GSMUA_Achr2G11810_001
I
0.929
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.878
GSMUA_Achr4G29170_001
Musa acuminata
GSMUA_Achr4G29170_001
I
0.901
GSMUA_Achr6G03200_001
Musa acuminata
GSMUA_Achr6G03200_001
N
0.908
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.899
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.893
Lus10005204.g
Linum usitatissimum
Lus10005204.g
N
0.973
Lus10013316.g
Linum usitatissimum
Lus10013316.g
N
0.973
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.883
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.883
Lus10034183.g
Linum usitatissimum
Lus10034183.g
N
0.984
Lus10043402.g
Linum usitatissimum
Lus10043402.g
N
0.984
MDP0000133636
Malus domestica
MDP0000133636
N
0.959
MDP0000907489
Malus domestica
MDP0000907489
N
0.886
mgf022344m
Mimulus guttatus
mgf022344m
I
0.884
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.900
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.878
NAC089
Arabidopsis thaliana
AT5G22290
N
0.968
NAC60
Arabidopsis thaliana
AT3G44290
N
0.980
OB08G13730
Oryza brachyantha
OB08G13730
I
0.893
OBART08G03460
Oryza barthii
OBART08G03460
I
0.894
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.894
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.894
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.894
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.883
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.894
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.894
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.883
OS08G0157900
Oryza sativa
OS08G0157900
I
0.883
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.901
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.907
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.902
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.986
PGSC0003DMG400019615
Solanum tuberosum
PGSC0003DMG400019615
I
0.977
Pm019659
Prunus mume
Pm019659
I
0.891
POPTR_0009s16290
Populus trichocarpa
POPTR_0009s16290
N
0.988
PRUPE_ppa008321mg
Prunus persica
PRUPE_ppa008321mg
N
0.952
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.874
SapurV1A.0561s0300
Salix purpurea
SapurV1A.0561s0300
N
0.985
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.893
Si013369m.g
Setaria italica
Si013369m.g
I
0.902
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.911
Solyc06g074170.2
Solanum lycopersicum
Solyc06g074170.2
I
0.984
Solyc11g068750.1
Solanum lycopersicum
Solyc11g068750.1
I
0.977
TCM_015535
Theobroma cacao
TCM_015535
I
0.874
TCM_041332
Theobroma cacao
TCM_041332
N
0.992
Thhalv10002027m.g
Eutrema salsugineum
Thhalv10002027m.g
I
0.941
Thhalv10002040m.g
Eutrema salsugineum
Thhalv10002040m.g
I
0.928
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.900
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.900
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.900
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.900