CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Eucgr.B03823
(
Eucalyptus grandis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Eucgr.B03823
T297689_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.B03823.1
NAC/NAM
23
149
YPGFKFSPSDAELISHYLAKKLEGIDKSVEQLIPEVDFSAHEPWDLPAKSIVPSESEWFFFSVRGRKYPKGSQSKRATEHGYWKATGKERNVKSSSAVIGTKRTLVFHLGRAPKGKRTEWIMHEYSM
Links
Other
NAC/NAM
family TFs
Other
Eucalyptus grandis
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_041332
Theobroma cacao
TCM_041332
N
0.963
POPTR_0009s16290
Populus trichocarpa
POPTR_0009s16290
N
0.962
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.962
Gorai.006G113700
Gossypium raimondii
Gorai.006G113700
N
0.961
Lus10034183.g
Linum usitatissimum
Lus10034183.g
N
0.961
Lus10043402.g
Linum usitatissimum
Lus10043402.g
N
0.961
Gorai.009G083500
Gossypium raimondii
Gorai.009G083500
N
0.959
SapurV1A.0561s0300
Salix purpurea
SapurV1A.0561s0300
N
0.959
evm.TU.supercontig_195.35
Carica papaya
evm.TU.supercontig_195.35
N
0.958
Solyc06g074170.2
Solanum lycopersicum
Solyc06g074170.2
I
0.957
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.957
30055.m001612
Ricinus communis
30055.m001612
N
0.955
cassava16016.m1
Manihot esculenta
cassava16016.m1
N
0.955
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.953
Bra021471
Brassica rapa
Bra021471
N
0.952
Ciclev10028618m.g
Citrus clementina
Ciclev10028618m.g
N
0.952
anac060
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000902
N
0.951
Carubv10019187m.g
Capsella rubella
Carubv10019187m.g
N
0.950
Lus10005204.g
Linum usitatissimum
Lus10005204.g
N
0.949
Lus10013316.g
Linum usitatissimum
Lus10013316.g
N
0.949
Bo1g063720
Brassica oleracea
Bo1g063720
N
0.948
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.948
PGSC0003DMG400019615
Solanum tuberosum
PGSC0003DMG400019615
I
0.948
Solyc11g068750.1
Solanum lycopersicum
Solyc11g068750.1
I
0.948
NAC60
Arabidopsis thaliana
AT3G44290
N
0.945
PRUPE_ppa008321mg
Prunus persica
PRUPE_ppa008321mg
N
0.936
Bo3g016820
Brassica oleracea
Bo3g016820
I
0.934
Bra006619
Brassica rapa
Bra006619
I
0.934
Bo2g023820
Brassica oleracea
Bo2g023820
N
0.932
Bra020182
Brassica rapa
Bra020182
N
0.932
Bra002403
Brassica rapa
Bra002403
N
0.928
MDP0000133636
Malus domestica
MDP0000133636
N
0.923
anac089
Arabidopsis lyrata
scaffold_602275.1
N
0.914
Bostr.26527s0049
Boechera stricta
Bostr.26527s0049
N
0.914
Cagra.0846s0004
Capsella grandiflora
Cagra.0846s0004
N
0.914
Carubv10001357m.g
Capsella rubella
Carubv10001357m.g
N
0.914
NAC089
Arabidopsis thaliana
AT5G22290
N
0.912
Bostr.0556s0726
Boechera stricta
Bostr.0556s0726
N
0.906
Ca_20988
Cicer arietinum
Ca_20988
I
0.898
MDP0000136652
Malus domestica
MDP0000136652
N
0.881
MDP0000182344
Malus domestica
MDP0000182344
N
0.881
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.880
GSMUA_Achr6G03200_001
Musa acuminata
GSMUA_Achr6G03200_001
N
0.878
F775_20638
Aegilops tauschii
F775_20638
I
0.877
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.877
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.877
GSMUA_Achr2G11810_001
Musa acuminata
GSMUA_Achr2G11810_001
I
0.875
Thhalv10002027m.g
Eutrema salsugineum
Thhalv10002027m.g
I
0.873
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.871