CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10028618m.g
(
Citrus clementina
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Ciclev10028618m.g
T297632_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10028618m
NAC/NAM
18
143
FPGFRFSPTDVELISFYLKKKMEGSEKCVEVISEIEICRYEPWDLPAKSVIQSDNEWFFFCARGRKYPNGSQSRRATELGYWKATGKERNVKSGSNVIGTKRTLVFHIGRAPKGERTEWIMHEYCM
Links
Other
NAC/NAM
family TFs
Other
Citrus clementina
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_041332
Theobroma cacao
TCM_041332
N
0.992
Gorai.006G113700
Gossypium raimondii
Gorai.006G113700
N
0.991
Gorai.009G083500
Gossypium raimondii
Gorai.009G083500
N
0.991
cassava16016.m1
Manihot esculenta
cassava16016.m1
N
0.990
POPTR_0009s16290
Populus trichocarpa
POPTR_0009s16290
N
0.989
30055.m001612
Ricinus communis
30055.m001612
N
0.989
SapurV1A.0561s0300
Salix purpurea
SapurV1A.0561s0300
N
0.985
evm.TU.supercontig_195.35
Carica papaya
evm.TU.supercontig_195.35
N
0.983
Lus10034183.g
Linum usitatissimum
Lus10034183.g
N
0.983
Lus10043402.g
Linum usitatissimum
Lus10043402.g
N
0.983
Solyc06g074170.2
Solanum lycopersicum
Solyc06g074170.2
I
0.982
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.982
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.982
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.981
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.980
Bo1g063720
Brassica oleracea
Bo1g063720
N
0.979
PGSC0003DMG400019615
Solanum tuberosum
PGSC0003DMG400019615
I
0.979
Solyc11g068750.1
Solanum lycopersicum
Solyc11g068750.1
I
0.979
anac060
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000902
N
0.978
NAC60
Arabidopsis thaliana
AT3G44290
N
0.977
Carubv10019187m.g
Capsella rubella
Carubv10019187m.g
N
0.977
Bra021471
Brassica rapa
Bra021471
N
0.976
Bo3g016820
Brassica oleracea
Bo3g016820
I
0.972
Bra006619
Brassica rapa
Bra006619
I
0.972
Bo2g023820
Brassica oleracea
Bo2g023820
N
0.971
Bra020182
Brassica rapa
Bra020182
N
0.971
Bra002403
Brassica rapa
Bra002403
N
0.970
Lus10005204.g
Linum usitatissimum
Lus10005204.g
N
0.970
Lus10013316.g
Linum usitatissimum
Lus10013316.g
N
0.970
Bostr.0556s0726
Boechera stricta
Bostr.0556s0726
N
0.967
anac089
Arabidopsis lyrata
scaffold_602275.1
N
0.964
Bostr.26527s0049
Boechera stricta
Bostr.26527s0049
N
0.964
Cagra.0846s0004
Capsella grandiflora
Cagra.0846s0004
N
0.964
Carubv10001357m.g
Capsella rubella
Carubv10001357m.g
N
0.964
NAC089
Arabidopsis thaliana
AT5G22290
N
0.963
MDP0000133636
Malus domestica
MDP0000133636
N
0.960
Eucgr.B03823
Eucalyptus grandis
Eucgr.B03823
N
0.952
PRUPE_ppa008321mg
Prunus persica
PRUPE_ppa008321mg
N
0.944
Thhalv10002027m.g
Eutrema salsugineum
Thhalv10002027m.g
I
0.939
ANAC040
Arabidopsis lyrata
fgenesh2_kg.4__689__AT2G27300.1
I
0.933
Thhalv10002040m.g
Eutrema salsugineum
Thhalv10002040m.g
I
0.920
GSMUA_Achr2G11810_001
Musa acuminata
GSMUA_Achr2G11810_001
I
0.908
GSMUA_Achr6G03200_001
Musa acuminata
GSMUA_Achr6G03200_001
N
0.903
Ca_20988
Cicer arietinum
Ca_20988
I
0.900
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.898
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.898
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.895
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.891
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.888
GSMUA_Achr1G03560_001
Musa acuminata
GSMUA_Achr1G03560_001
I
0.884
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.881
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.873
MDP0000907489
Malus domestica
MDP0000907489
N
0.871