CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30055.m001612
(
Ricinus communis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
30055.m001612
T296780_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30055.m001612
NAC/NAM
18
144
FPGFRFSPTDVELISYYLKKKMEGAEKCVEVISEVEICSHEPWDLPAAKAVIQSENEWFFFSARGRKYPNGTQSRRATELGYWKATGKERNVKSGSDVIGTKRTLVFHIGRAPKGERTEWIMHEYCM
Links
Other
NAC/NAM
family TFs
Other
Ricinus communis
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0009s16290
Populus trichocarpa
POPTR_0009s16290
N
0.992
TCM_041332
Theobroma cacao
TCM_041332
N
0.989
Ciclev10028618m.g
Citrus clementina
Ciclev10028618m.g
N
0.989
SapurV1A.0561s0300
Salix purpurea
SapurV1A.0561s0300
N
0.987
cassava16016.m1
Manihot esculenta
cassava16016.m1
N
0.986
Gorai.006G113700
Gossypium raimondii
Gorai.006G113700
N
0.986
Gorai.009G083500
Gossypium raimondii
Gorai.009G083500
N
0.986
Lus10034183.g
Linum usitatissimum
Lus10034183.g
N
0.984
Lus10043402.g
Linum usitatissimum
Lus10043402.g
N
0.984
evm.TU.supercontig_195.35
Carica papaya
evm.TU.supercontig_195.35
N
0.981
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.978
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.977
Bra021471
Brassica rapa
Bra021471
N
0.976
Solyc06g074170.2
Solanum lycopersicum
Solyc06g074170.2
I
0.976
Bo1g063720
Brassica oleracea
Bo1g063720
N
0.974
NAC60
Arabidopsis thaliana
AT3G44290
N
0.973
anac060
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000902
N
0.973
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.973
Carubv10019187m.g
Capsella rubella
Carubv10019187m.g
N
0.973
PGSC0003DMG400019615
Solanum tuberosum
PGSC0003DMG400019615
I
0.972
Solyc11g068750.1
Solanum lycopersicum
Solyc11g068750.1
I
0.972
Lus10005204.g
Linum usitatissimum
Lus10005204.g
N
0.971
Lus10013316.g
Linum usitatissimum
Lus10013316.g
N
0.971
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.970
Bo3g016820
Brassica oleracea
Bo3g016820
I
0.966
Bra006619
Brassica rapa
Bra006619
I
0.966
Bostr.0556s0726
Boechera stricta
Bostr.0556s0726
N
0.964
Bo2g023820
Brassica oleracea
Bo2g023820
N
0.963
Bra020182
Brassica rapa
Bra020182
N
0.963
Bra002403
Brassica rapa
Bra002403
N
0.961
anac089
Arabidopsis lyrata
scaffold_602275.1
N
0.957
Bostr.26527s0049
Boechera stricta
Bostr.26527s0049
N
0.957
Cagra.0846s0004
Capsella grandiflora
Cagra.0846s0004
N
0.957
Carubv10001357m.g
Capsella rubella
Carubv10001357m.g
N
0.957
NAC089
Arabidopsis thaliana
AT5G22290
N
0.955
Eucgr.B03823
Eucalyptus grandis
Eucgr.B03823
N
0.955
MDP0000133636
Malus domestica
MDP0000133636
N
0.939
Thhalv10002027m.g
Eutrema salsugineum
Thhalv10002027m.g
I
0.939
ANAC040
Arabidopsis lyrata
fgenesh2_kg.4__689__AT2G27300.1
I
0.933
PRUPE_ppa008321mg
Prunus persica
PRUPE_ppa008321mg
N
0.926
Thhalv10002040m.g
Eutrema salsugineum
Thhalv10002040m.g
I
0.920
GSMUA_Achr6G03200_001
Musa acuminata
GSMUA_Achr6G03200_001
N
0.891
Ca_20988
Cicer arietinum
Ca_20988
I
0.890
GSMUA_Achr2G11810_001
Musa acuminata
GSMUA_Achr2G11810_001
I
0.883
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.883
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.876
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.872
GSMUA_Achr1G03560_001
Musa acuminata
GSMUA_Achr1G03560_001
I
0.870