Pavir.Ga01597 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ga01597 T298861_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.885 0.544
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.883 0.544
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga01597.1.p NAC/NAM 58 202

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001046 Ricinus communis 29738.m001046 I 0.872
29912.m005354 Ricinus communis 29912.m005354 I 0.886
29917.m002016 Ricinus communis 29917.m002016 I 0.941
29983.m003125 Ricinus communis 29983.m003125 I 0.891
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.900
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I 0.913
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.892
anac075 Arabidopsis thaliana AT4G29230 D 0.885
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.885
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.897
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I 0.906
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.888
BGIOSGA006133 Oryza indica BGIOSGA006133 N 0.925
BGIOSGA014881 Oryza indica BGIOSGA014881 N 0.908
BGIOSGA022664 Oryza indica BGIOSGA022664 I 0.939
Bo1g016630 Brassica oleracea Bo1g016630 I 0.887
Bo7g113660 Brassica oleracea Bo7g113660 I 0.887
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.885
Bra011090 Brassica rapa Bra011090 I 0.887
Bra024152 Brassica rapa Bra024152 I 0.887
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.939
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.908
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I 0.955
BRADI5G13450 Brachypodium distachyon BRADI5G13450 N 0.896
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.885
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.885
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.886
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.875
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.917
cassava17166.m1 Manihot esculenta cassava17166.m1 I 0.874
cassava3690.m1 Manihot esculenta cassava3690.m1 I 0.881
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.886
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.881
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.888
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.936
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.874
Cla011431 Citrullus lanatus Cla011431 I 0.885
Cla020673 Citrullus lanatus Cla020673 I 0.872
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.872
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.885
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.886
Eucgr.G02349 Eucalyptus grandis Eucgr.G02349 I 0.880
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.897
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.876
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.886
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.897
F775_00415 Aegilops tauschii F775_00415 N 0.913
F775_07141 Aegilops tauschii F775_07141 I 0.887
F775_07518 Aegilops tauschii F775_07518 I 0.913
F775_14938 Aegilops tauschii F775_14938 N 0.931
F775_16052 Aegilops tauschii F775_16052 I 0.895
F775_30638 Aegilops tauschii F775_30638 I 0.950
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.871
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.886
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.886
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.897
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.902
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.884
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.886
GLYMA16G07501 Glycine max GLYMA16G07501 N 0.877
GLYMA19G00640 Glycine max GLYMA19G00640 N 0.892
GLYMA19G08510 Glycine max GLYMA19G08510 N 0.889
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.918
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.911
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.916
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.891
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.883
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.886
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.886
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.915
GRMZM2G038073 Zea mays GRMZM2G038073 N 0.915
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.915
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.915
GRMZM2G104078 Zea mays GRMZM2G104078 N 0.920
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.877
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.878
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.915
GRMZM2G450445 Zea mays GRMZM2G450445 N 0.945
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.881
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.902
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.884
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.877
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.877
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.882
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I 0.920
GSMUA_AchrUn_randomG17050_001 Musa acuminata GSMUA_AchrUn_randomG17050_001 I 0.926
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.896
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.888
LPERR02G18380 Leersia perrieri LPERR02G18380 N 0.924
LPERR04G12800 Leersia perrieri LPERR04G12800 N 0.896
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.880
MDP0000124509 Malus domestica MDP0000124509 I 0.887
mgf012882m Mimulus guttatus mgf012882m I 0.902
mgf018486m Mimulus guttatus mgf018486m I 0.912
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.908
OB01G15780 Oryza brachyantha OB01G15780 I 0.888
OB02G30060 Oryza brachyantha OB02G30060 N 0.921
OB06G19430 Oryza brachyantha OB06G19430 I 0.934
OBART01G05840 Oryza barthii OBART01G05840 I 0.888
OBART02G22660 Oryza barthii OBART02G22660 N 0.925
OBART04G16110 Oryza barthii OBART04G16110 N 0.908
OBART06G10240 Oryza barthii OBART06G10240 I 0.940
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.888
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N 0.925
OGLUM04G16020 Oryza glumaepatula OGLUM04G16020 N 0.908
OGLUM06G11140 Oryza glumaepatula OGLUM06G11140 I 0.940
OLONG_005904 Oryza longistaminata OLONG_005904 N 0.908
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.888
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.873
OLONG_017685 Oryza longistaminata OLONG_017685 I 0.940
OLONG_021848 Oryza longistaminata OLONG_021848 N 0.931
OMERI01G02010 Oryza meridionalis OMERI01G02010 N 0.908
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.893
OMERI02G22200 Oryza meridionalis OMERI02G22200 N 0.925
OMERI06G11940 Oryza meridionalis OMERI06G11940 I 0.940
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.888
ONIVA02G25300 Oryza nivara ONIVA02G25300 N 0.925
ONIVA04G14230 Oryza nivara ONIVA04G14230 N 0.908
ONIVA06G11950 Oryza nivara ONIVA06G11950 I 0.940
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.888
OPUNC02G20570 Oryza punctata OPUNC02G20570 N 0.925
OPUNC04G13980 Oryza punctata OPUNC04G13980 N 0.950
OPUNC06G09830 Oryza punctata OPUNC06G09830 I 0.932
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.874
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.888
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.873
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N 0.925
ORGLA06G0096700 Oryza glaberrima ORGLA06G0096700 I 0.940
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.888
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N 0.925
ORUFI04G17470 Oryza rufipogon ORUFI04G17470 N 0.908
ORUFI06G10770 Oryza rufipogon ORUFI06G10770 I 0.940
OS01G0191300 Oryza sativa OS01G0191300 I 0.888
OS02G0594800 Oryza sativa OS02G0594800 N 0.925
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.904
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I 0.941
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I 0.916
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.943
Pavir.Db01100 Panicum virgatum Pavir.Db01100 I 0.905
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.878
Pavir.Gb01338 Panicum virgatum Pavir.Gb01338 I 0.989
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.875
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.878
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.954
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.896
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I 0.876
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.884
PK17141.1 Cannabis sativa PK17141.1 I 0.913
PK25812.1 Cannabis sativa PK25812.1 I 0.877
PK27085.1 Cannabis sativa PK27085.1 D 0.883
PK28347.1 Cannabis sativa PK28347.1 I 0.881
Pm015625 Prunus mume Pm015625 I 0.903
Pm027280 Prunus mume Pm027280 I 0.884
Pm029010 Prunus mume Pm029010 I 0.874
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.917
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.886
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I 0.917
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.895
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.883
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.883
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.886
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.884
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I 0.882
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.896
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.892
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.886
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.878
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.882
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.884
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.882
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.884
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.884
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.878
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.884
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.878
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.875
Sb04g024780 Sorghum bicolor Sb04g024780 N 0.917
Sb06g020103 Sorghum bicolor Sb06g020103 I 0.965
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.918
Si001527m.g Setaria italica Si001527m.g I 0.878
Si002301m.g Setaria italica Si002301m.g I 0.875
Si006639m.g Setaria italica Si006639m.g I 0.942
Si010735m.g Setaria italica Si010735m.g I 0.954
Si012740m.g Setaria italica Si012740m.g N 0.978
Si017393m.g Setaria italica Si017393m.g I 0.966
Si019444m.g Setaria italica Si019444m.g I 0.904
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.895
Solyc02g093420.2 Solanum lycopersicum Solyc02g093420.2 I 0.883
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I 0.876
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.884
TCM_008229 Theobroma cacao TCM_008229 I 0.891
TCM_011869 Theobroma cacao TCM_011869 I 0.896
TCM_016984 Theobroma cacao TCM_016984 I 0.934
TCM_037747 Theobroma cacao TCM_037747 I 0.886
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.888
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.881
Traes_2DL_3757D78B3 Triticum aestivum Traes_2DL_3757D78B3 N 0.913
Traes_2DL_AE270CBAA Triticum aestivum Traes_2DL_AE270CBAA N 0.913
Traes_2DL_AE270CBAA1 Triticum aestivum Traes_2DL_AE270CBAA1 N 0.913
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I 0.928
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I 0.950
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I 0.950
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I 0.927
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.934
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.934
TRIUR3_21992 Triticum urartu TRIUR3_21992 I 0.927
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.875
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.887
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.886
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.936