CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-101
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003691
T306213_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.950
0.700
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.923
0.614
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
H12C20.6a
Nuclear receptor
5
74
ELCLVCNDLSSGYHYGVPSCNGCKTFFRRTIMKKQLFVCQHEKNCPVDKSIRCACRFCRFEKCIQVGMDK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
241 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A0A075Q982_PATMI
Patiria miniata
A0A075Q982_PATMI
D
AAI66068
Xenopus tropicalis
AAI66068
I
Aan_R005441
Calypte anna
Aan_R005441
N
Aan_R007630
Calypte anna
Aan_R007630
N
AATE020165
Anopheles atroparvus
AATE020165
N
Afo_R015481
Aptenodytes forsteri
Afo_R015481
N
Alligator_sinensis_CCG006942.1
Alligator sinensis
Alligator_sinensis_CCG006942.1
N
Alligator_sinensis_CCG012002.1
Alligator sinensis
Alligator_sinensis_CCG012002.1
I
Alligator_sinensis_CCG014450.1
Alligator sinensis
Alligator_sinensis_CCG014450.1
I
AMEM004106
Anopheles merus
AMEM004106
N
ANCCAN_02907
Ancylostoma caninum
ANCCAN_02907
N
ANCCAN_17994
Ancylostoma caninum
ANCCAN_17994
N
Brh_R005675
Buceros rhinoceros
Brh_R005675
N
Brh_R007719
Buceros rhinoceros
Brh_R007719
I
CapteG223644
Capitella teleta
CapteG223644
I
CGI_10020437
Crassostrea gigas
CGI_10020437
I
CJA37253
Caenorhabditis japonica
CJA37253
N
Cmyd_10011686
Chelonia mydas
Cmyd_10011686
N
ENSACAG00000007044
Anolis carolinensis
ENSACAG00000007044
N
ENSACAG00000011860
Anolis carolinensis
ENSACAG00000011860
N
ENSAMEG00000004661
Ailuropoda melanoleuca
ENSAMEG00000004661
I
ENSAMEG00000012360
Ailuropoda melanoleuca
ENSAMEG00000012360
I
ENSAMEG00000012731
Ailuropoda melanoleuca
ENSAMEG00000012731
I
ENSAMXG00000009990
Astyanax mexicanus
ENSAMXG00000009990
I
ENSAMXG00000010492
Astyanax mexicanus
ENSAMXG00000010492
I
ENSAMXG00000012247
Astyanax mexicanus
ENSAMXG00000012247
I
ENSBTAP00000018875-D1
Bos grunniens
ENSBTAP00000018875-D1
I
ENSCPOG00000005881
Cavia porcellus
ENSCPOG00000005881
I
ENSCSAG00000002587
Chlorocebus sabaeus
ENSCSAG00000002587
I
ENSCSAG00000009676
Chlorocebus sabaeus
ENSCSAG00000009676
I
ENSCSAG00000015663
Chlorocebus sabaeus
ENSCSAG00000015663
I
ENSECAG00000002502
Equus caballus
ENSECAG00000002502
I
ENSECAG00000011159
Equus caballus
ENSECAG00000011159
N
ENSECAG00000018160
Equus caballus
ENSECAG00000018160
N
ENSFALG00000004466
Ficedula albicollis
ENSFALG00000004466
I
ENSFALG00000009181
Ficedula albicollis
ENSFALG00000009181
I
ENSGMOG00000001960
Gadus morhua
ENSGMOG00000001960
N
ENSGMOG00000002634
Gadus morhua
ENSGMOG00000002634
I
ENSGMOG00000003675
Gadus morhua
ENSGMOG00000003675
I
ENSGMOG00000014981
Gadus morhua
ENSGMOG00000014981
I
ENSLACG00000002795
Latimeria chalumnae
ENSLACG00000002795
N
ENSLACG00000003893
Latimeria chalumnae
ENSLACG00000003893
I
ENSLACG00000016985
Latimeria chalumnae
ENSLACG00000016985
I
ENSLOCG00000002398
Lepisosteus oculatus
ENSLOCG00000002398
I
ENSLOCG00000008583
Lepisosteus oculatus
ENSLOCG00000008583
I
ENSLOCG00000013335
Lepisosteus oculatus
ENSLOCG00000013335
I
ENSMEUG00000014480
Macropus eugenii
ENSMEUG00000014480
I
ENSMGAG00000006532
Meleagris gallopavo
ENSMGAG00000006532
N
ENSMGAG00000011118
Meleagris gallopavo
ENSMGAG00000011118
N
ENSMICG00000005972
Microcebus murinus
ENSMICG00000005972
I
ENSMICG00000015729
Microcebus murinus
ENSMICG00000015729
I
ENSMMUG00000001904
Macaca mulatta
ENSMMUG00000001904
I
ENSMODG00000012526
Monodelphis domestica
ENSMODG00000012526
I
ENSMPUG00000000551
Mustela putorius furo
ENSMPUG00000000551
I
ENSMPUG00000011981
Mustela putorius furo
ENSMPUG00000011981
I
ENSMPUG00000015272
Mustela putorius furo
ENSMPUG00000015272
I
ENSNLEG00000001655
Nomascus leucogenys
ENSNLEG00000001655
I
ENSNLEG00000002040
Nomascus leucogenys
ENSNLEG00000002040
I
ENSNLEG00000004050
Nomascus leucogenys
ENSNLEG00000004050
I
ENSOANG00000028644
Ornithorhynchus anatinus
ENSOANG00000028644
N
ENSOARG00000006620
Ovis aries
ENSOARG00000006620
I
ENSOARG00000008340
Ovis aries
ENSOARG00000008340
I
ENSOARG00000014467
Ovis aries
ENSOARG00000014467
I
ENSOCUG00000000451
Oryctolagus cuniculus
ENSOCUG00000000451
I
ENSONIG00000007180
Oreochromis niloticus
ENSONIG00000007180
I
ENSONIG00000008933
Oreochromis niloticus
ENSONIG00000008933
I
ENSONIG00000018223
Oreochromis niloticus
ENSONIG00000018223
I
ENSONIG00000019678
Oreochromis niloticus
ENSONIG00000019678
I
ENSP00000177694
Macaca fascicularis
ENSP00000177694
I
ENSP00000374205
Macaca fascicularis
ENSP00000374205
I
ENSP00000374205-D1
Bos grunniens
ENSP00000374205-D1
I
ENSP00000388620
Macaca fascicularis
ENSP00000388620
I
ENSP00000388620-D1
Bos grunniens
ENSP00000388620-D1
I
ENSPANG00000011539
Papio anubis
ENSPANG00000011539
I
ENSPANG00000018688
Papio anubis
ENSPANG00000018688
I
ENSPFOG00000006471
Poecilia formosa
ENSPFOG00000006471
I
ENSPFOG00000017461
Poecilia formosa
ENSPFOG00000017461
I
ENSPFOG00000017938
Poecilia formosa
ENSPFOG00000017938
I
ENSPFOG00000018019
Poecilia formosa
ENSPFOG00000018019
I
ENSPMAG00000003985
Petromyzon marinus
ENSPMAG00000003985
I
ENSPPYG00000008879
Pongo abelii
ENSPPYG00000008879
I
ENSPPYG00000011585
Pongo abelii
ENSPPYG00000011585
N
ENSPPYG00000012882
Pongo abelii
ENSPPYG00000012882
I
ENSPPYG00000014055
Pongo abelii
ENSPPYG00000014055
I
ENSPSIG00000004373
Pelodiscus sinensis
ENSPSIG00000004373
I
ENSPSIG00000005360
Pelodiscus sinensis
ENSPSIG00000005360
I
ENSSHAG00000016616
Sarcophilus harrisii
ENSSHAG00000016616
I
ENSSHAG00000017378
Sarcophilus harrisii
ENSSHAG00000017378
I
ENSSHAG00000018315
Sarcophilus harrisii
ENSSHAG00000018315
I
ENSSSCG00000011219
Sus scrofa
ENSSSCG00000011219
I
ENSSSCG00000022626
Sus scrofa
ENSSSCG00000022626
I
ENSSTOG00000001626
Ictidomys tridecemlineatus
ENSSTOG00000001626
I
ENSSTOG00000020918
Ictidomys tridecemlineatus
ENSSTOG00000020918
I
ENSSTOG00000023843
Ictidomys tridecemlineatus
ENSSTOG00000023843
I
ENSTGUG00000003557
Taeniopygia guttata
ENSTGUG00000003557
N
ENSTGUG00000006709
Taeniopygia guttata
ENSTGUG00000006709
N
ENSTRUG00000007811
Takifugu rubripes
ENSTRUG00000007811
N
ENSTSYG00000004047
Tarsius syrichta
ENSTSYG00000004047
N
ENSTTRG00000006645
Tursiops truncatus
ENSTTRG00000006645
I
ENSVPAG00000002720
Vicugna pacos
ENSVPAG00000002720
I
ENSVPAG00000011101
Vicugna pacos
ENSVPAG00000011101
I
ENSXMAG00000000528
Xiphophorus maculatus
ENSXMAG00000000528
I
ENSXMAG00000011427
Xiphophorus maculatus
ENSXMAG00000011427
I
ENSXMAG00000013655
Xiphophorus maculatus
ENSXMAG00000013655
I
ENSXMAG00000014284
Xiphophorus maculatus
ENSXMAG00000014284
I
EOMES
Anolis carolinensis
ENSACAG00000014201
I
EOMES
Bos taurus
ENSBTAG00000016920
I
EOMES
Canis familiaris
ENSCAFG00000005510
I
EOMES
Callithrix jacchus
ENSCJAG00000004263
I
EOMES
Cavia porcellus
ENSCPOG00000004381
I
Eomes
Dipodomys ordii
ENSDORG00000016346
I
EOMES
Equus caballus
ENSECAG00000021052
I
EOMES
Erinaceus europaeus
ENSEEUG00000005958
I
EOMES
Felis catus
ENSFCAG00000003602
I
EOMES
Homo sapiens
ENSG00000163508
D
EOMES
Gallus gallus
ENSGALG00000027247
I
EOMES
Gorilla gorilla
ENSGGOG00000008358
I
EOMES
Loxodonta africana
ENSLAFG00000004142
I
EOMES
Myotis lucifugus
ENSMLUG00000001462
I
Eomes
Mus musculus
ENSMUSG00000032446
D
EOMES
Ornithorhynchus anatinus
ENSOANG00000012619
I
EOMES
Otolemur garnettii
ENSOGAG00000030966
I
EOMES
Procavia capensis
ENSPCAG00000013650
I
EOMES
Pan troglodytes
ENSPTRG00000014705
I
EOMES
Pteropus vampyrus
ENSPVAG00000009999
I
eomes
Xenopus tropicalis
XB-GENE-479769
I
eomes.L
Xenopus laevis
XB-GENE-865305
I
eomes.S
Xenopus laevis
XB-GENE-6487182
I
eomesa
Danio rerio
ENSDARG00000006640
I
eomesa
Gasterosteus aculeatus
ENSGACG00000003160
I
eomesa
Oryzias latipes
ENSORLG00000002320
I
eomesa
Tetraodon nigroviridis
ENSTNIG00000017582
I
eomesa
Takifugu rubripes
ENSTRUG00000005361
I
eomesb
Danio rerio
ENSDARG00000104243
I
eomesb
Gasterosteus aculeatus
ENSGACG00000006345
I
eomesb
Oryzias latipes
ENSORLG00000005393
I
eomesb
Tetraodon nigroviridis
ENSTNIG00000019116
I
eomesb
Takifugu rubripes
ENSTRUG00000008966
I
estExt_fgenesh2_kg.C_1840001
Branchiostoma floridae
estExt_fgenesh2_kg.C_1840001
I
fgenesh2_pg.scaffold_55000054
Branchiostoma floridae
fgenesh2_pg.scaffold_55000054
I
Gfo_R006963
Geospiza fortis
Gfo_R006963
N
HelroG89689
Helobdella robusta
HelroG89689
N
ISCW019280
Ixodes scapularis
ISCW019280
N
L893_g18550
Steinernema glaseri
L893_g18550
N
LotgiG129911
Lottia gigantea
LotgiG129911
I
Myotis_brandtii_Eomes_10021705
Myotis brandtii
Myotis_brandtii_Eomes_10021705
N
Myotis_brandtii_KPNB1_10030428
Myotis brandtii
Myotis_brandtii_KPNB1_10030428
I
Myotis_brandtii_SLC4A10_10035570
Myotis brandtii
Myotis_brandtii_SLC4A10_10035570
I
NBR_0001696801
Nippostrongylus brasiliensis
NBR_0001696801
N
Ocbimv22013221m.g
Octopus bimaculoides
Ocbimv22013221m.g
N
Ogr12599
Ophisaurus gracilis
Ogr12599
N
Ogr17175
Ophisaurus gracilis
Ogr17175
I
Pvit_13952
Pogona vitticeps
Pvit_13952
N
Pvit_15940
Pogona vitticeps
Pvit_15940
I
Pvit_16634
Pogona vitticeps
Pvit_16634
I
Sakowv30001714m.g
Saccoglossus kowalevskii
Sakowv30001714m.g
I
Sakowv30002752m.g
Saccoglossus kowalevskii
Sakowv30002752m.g
I
SPU_025584
Strongylocentrotus purpuratus
SPU_025584
D
TBR1
Bos taurus
ENSBTAG00000021692
I
TBR1
Canis familiaris
ENSCAFG00000009984
I
TBR1
Callithrix jacchus
ENSCJAG00000005603
I
TBR1
Dasypus novemcinctus
ENSDNOG00000009816
I
TBR1
Felis catus
ENSFCAG00000025073
I
TBR1
Homo sapiens
ENSG00000136535
D
TBR1
Gorilla gorilla
ENSGGOG00000015752
I
TBR1
Loxodonta africana
ENSLAFG00000011541
I
TBR1
Myotis lucifugus
ENSMLUG00000006008
I
TBR1
Macaca mulatta
ENSMMUG00000011911
I
TBR1
Monodelphis domestica
ENSMODG00000005353
I
TBR1
Oryctolagus cuniculus
ENSOCUG00000005884
I
TBR1
Otolemur garnettii
ENSOGAG00000004936
I
TBR1
Ochotona princeps
ENSOPRG00000005150
I
TBR1
Pan troglodytes
ENSPTRG00000012576
I
Tbr1
Rattus norvegicus
ENSRNOG00000005049
I
TBR1
Tupaia belangeri
ENSTBEG00000014183
I
tbr1
Xenopus tropicalis
XB-GENE-942241
I
tbr1a
Danio rerio
ENSDARG00000076259
I
tbr1b
Danio rerio
ENSDARG00000004712
I
tbr1b
Gasterosteus aculeatus
ENSGACG00000005648
I
tbr1b
Oryzias latipes
ENSORLG00000016828
I
tbr1b
Tetraodon nigroviridis
ENSTNIG00000016497
I
tbr1b
Takifugu rubripes
ENSTRUG00000005183
I
TBX21
Bos taurus
ENSBTAG00000014199
I
TBX21
Canis familiaris
ENSCAFG00000016705
I
TBX21
Callithrix jacchus
ENSCJAG00000007796
I
TBX21
Cavia porcellus
ENSCPOG00000026273
I
tbx21
Danio rerio
ENSDARG00000004473
I
Tbx21
Dipodomys ordii
ENSDORG00000013302
I
TBX21
Felis catus
ENSFCAG00000010607
I
TBX21
Homo sapiens
ENSG00000073861
D
tbx21
Gasterosteus aculeatus
ENSGACG00000003829
N
TBX21
Gorilla gorilla
ENSGGOG00000002208
I
TBX21
Myotis lucifugus
ENSMLUG00000014542
I
TBX21
Macaca mulatta
ENSMMUG00000007098
I
Tbx21
Mus musculus
ENSMUSG00000001444
D
TBX21
Oryctolagus cuniculus
ENSOCUG00000012907
I
TBX21
Otolemur garnettii
ENSOGAG00000006160
I
tbx21
Oryzias latipes
ENSORLG00000012193
N
TBX21
Pan troglodytes
ENSPTRG00000009335
I
TBX21
Pteropus vampyrus
ENSPVAG00000004921
I
Tbx21
Rattus norvegicus
ENSRNOG00000009427
I
TBX21
Sus scrofa
ENSSSCG00000017517
I
tbx21
Tetraodon nigroviridis
ENSTNIG00000010103
I
tbx21
Takifugu rubripes
ENSTRUG00000012995
I
tbx21
Xenopus tropicalis
XB-GENE-479103
I
tbx4.L
Xenopus laevis
XB-GENE-951383
N
TBX5
Callithrix jacchus
ENSCJAG00000009744
I
tbx5.S
Xenopus laevis
XB-GENE-6253071
N