SMUV_0000721901 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000721901 T310421_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-122
M00696_2.00 		Caenorhabditis elegans
NDTGGAGTVN
NBACTCCAHN		 PBM
Narasimhan et al.(2015)
pTH9326 		0.779 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000721901-mRNA-1 Nuclear receptor 5 74

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00107p00095070 Amborella trichopoda AMTR_s00107p00095070 I 0.000
AT5G65130 Arabidopsis thaliana AT5G65130 D 0.000
Bo00790s010 Brassica oleracea Bo00790s010 I 0.000
Bo1g051230 Brassica oleracea Bo1g051230 I 0.000
Bo7g111910 Brassica oleracea Bo7g111910 I 0.000
Bo8g054130 Brassica oleracea Bo8g054130 I 0.000
Bostr.0568s0279 Boechera stricta Bostr.0568s0279 I 0.000
Bostr.7867s0648 Boechera stricta Bostr.7867s0648 I 0.000
Bra010383 Brassica rapa Bra010383 I 0.000
Bra024222 Brassica rapa Bra024222 I 0.000
Bra024357 Brassica rapa Bra024357 I 0.000
Bra024358 Brassica rapa Bra024358 I 0.000
Bra026280 Brassica rapa Bra026280 I 0.000
Cagra.0917s0073 Capsella grandiflora Cagra.0917s0073 I 0.000
Cagra.1225s0083 Capsella grandiflora Cagra.1225s0083 I 0.000
Carubv10005203m.g Capsella rubella Carubv10005203m.g I 0.000
Carubv10026925m.g Capsella rubella Carubv10026925m.g I 0.000
ERF054 Arabidopsis thaliana AT4G28140 D 0.000
fgenesh2_kg.7__1395__AT4G28140.1 Arabidopsis lyrata fgenesh2_kg.7__1395__AT4G28140.1 I 0.000
mgf012639m Mimulus guttatus mgf012639m I 0.000
scaffold_803239.1 Arabidopsis lyrata scaffold_803239.1 I 0.000
Thhalv10005326m.g Eutrema salsugineum Thhalv10005326m.g I 0.000
Thhalv10025862m.g Eutrema salsugineum Thhalv10025862m.g I 0.000
VIT_19s0014g03180 Vitis vinifera VIT_19s0014g03180 I 0.000