CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_sca_3_chr4_2_00260
(
Nectria haematococca
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
estExt_fgenesh1_pm.C_sca_3_chr4_2_00260
T312184_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_sca_3_chr4_2_00260
Paired box
26
79
LKTTPDQVVDQICKLARKGATPSQIGVVLRDSHGIAQVKIVTGNRILRILKSNG
Links
Other
Paired box
family TFs
Other
Nectria haematococca
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava12557.valid.m1
Manihot esculenta
cassava12557.valid.m1
N
0.000
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
0.000
Ca_11038
Cicer arietinum
Ca_11038
N
0.000
Eucgr.I01395
Eucalyptus grandis
Eucgr.I01395
N
0.000
evm.TU.supercontig_37.170
Carica papaya
evm.TU.supercontig_37.170
N
0.000
gene07618-v1.0-hybrid
Fragaria vesca
gene07618-v1.0-hybrid
N
0.000
MDP0000225222
Malus domestica
MDP0000225222
N
0.000
Pm020837
Prunus mume
Pm020837
I
0.000