Cla019628 (Citrullus lanatus)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Cla019628 T315845_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla019628 PLATZ 73 146

Links

Other PLATZ family TFs
Other Citrullus lanatus TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29417.m000034 Ricinus communis 29417.m000034 N 0.833
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.708
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.784
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.743
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.716
Bo2g121040 Brassica oleracea Bo2g121040 N 0.797
Bo7g041160 Brassica oleracea Bo7g041160 N 0.784
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.784
Bra014899 Brassica rapa Bra014899 N 0.784
Bra038403 Brassica rapa Bra038403 N 0.797
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.730
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.750
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.784
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.784
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.784
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.792
Cla010042 Citrullus lanatus Cla010042 N 0.811
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.811
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.986
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.792
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.797
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.824
F775_02274 Aegilops tauschii F775_02274 N 0.708
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.784
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.744
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.778
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.806
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.833
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.811
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.778
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.722
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.708
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.750
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.750
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.750
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.736
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.797
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.716
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.770
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.757
MDP0000197021 Malus domestica MDP0000197021 N 0.760
MDP0000891068 Malus domestica MDP0000891068 N 0.760
mgf021599m Mimulus guttatus mgf021599m N 0.731
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.730
MTR_2g036170 Medicago truncatula MTR_2g036170 N 0.727
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.744
OB02G14750 Oryza brachyantha OB02G14750 N 0.764
OBART02G05520 Oryza barthii OBART02G05520 N 0.743
OBART06G24000 Oryza barthii OBART06G24000 N 0.716
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.743
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.703
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.716
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.716
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.743
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.716
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.764
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.716
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.792
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.716
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.743
OS02G0172800 Oryza sativa OS02G0172800 N 0.743
OS06G0666100 Oryza sativa OS06G0666100 N 0.716
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.757
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.757
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.703
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.750
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.730
PK04104.1 Cannabis sativa PK04104.1 N 0.833
PK22765.1 Cannabis sativa PK22765.1 N 0.719
Pm010795 Prunus mume Pm010795 N 0.890
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.819
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.819
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.890
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.797
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.770
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.757
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.722
Si007394m.g Setaria italica Si007394m.g N 0.712
Si018139m.g Setaria italica Si018139m.g N 0.778
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.764
TCM_006017 Theobroma cacao TCM_006017 N 0.811
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.797
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.750
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.750
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.730
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.716
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.764
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.778