nfatc1 (Tetraodon nigroviridis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSTNIG00000002929 T317538_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.888 0.888
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.888 0.888
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.881 0.881
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.874 0.874
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.846 0.846
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.846 0.846
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.846 0.846
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.846 0.846
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.846 0.846
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.846 0.846
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.846 0.846
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.846 0.846
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.846 0.846
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.846 0.846
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.846 0.846
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.846 0.846
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.846 0.846
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.846 0.846
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.846 0.846
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.832 0.832
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.832 0.832
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.832 0.832
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.832 0.832
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.832 0.832
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.832 0.832
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.832 0.832
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.832 0.832
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.832 0.832
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.832 0.832
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.825 0.825
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.811 0.811
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.811 0.811
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.811 0.811
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.811 0.811
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.811 0.811
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.811 0.811
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.811 0.811
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.811 0.811
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.811 0.811
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.811 0.811
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.811 0.811
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.797 0.797
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.797 0.797
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.797 0.797
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.797 0.797
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.797 0.797
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.797 0.797
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.797 0.797
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.797 0.797
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.797 0.797
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.734 0.734
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000005497 Rel 377 537

Links

Other Rel family TFs
Other Tetraodon nigroviridis TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004747 Calypte anna Aan_R004747 I
Afo_R014150 Aptenodytes forsteri Afo_R014150 I
Alligator_sinensis_CCG017359.1 Alligator sinensis Alligator_sinensis_CCG017359.1 I
Brh_R002803 Buceros rhinoceros Brh_R002803 I
Cmyd_10021519 Chelonia mydas Cmyd_10021519 I
ENSAPLG00000007946 Anas platyrhynchos ENSAPLG00000007946 I
ENSCSAG00000010546 Chlorocebus sabaeus ENSCSAG00000010546 I
ENSFALG00000004050 Ficedula albicollis ENSFALG00000004050 I
ENSGMOG00000004501 Gadus morhua ENSGMOG00000004501 I
ENSLACG00000001553 Latimeria chalumnae ENSLACG00000001553 I
ENSLOCG00000015046 Lepisosteus oculatus ENSLOCG00000015046 I
ENSMEUG00000003811 Macropus eugenii ENSMEUG00000003811 I
ENSMPUG00000006315 Mustela putorius furo ENSMPUG00000006315 I
ENSNLEG00000002624 Nomascus leucogenys ENSNLEG00000002624 I
ENSOARG00000001832 Ovis aries ENSOARG00000001832 I
ENSONIG00000017662 Oreochromis niloticus ENSONIG00000017662 I
ENSP00000297977 Macaca fascicularis ENSP00000297977 I
ENSPANG00000014327 Papio anubis ENSPANG00000014327 I
ENSPFOG00000004291 Poecilia formosa ENSPFOG00000004291 I
ENSPMAG00000004328 Petromyzon marinus ENSPMAG00000004328 I
ENSPPYG00000020514 Pongo abelii ENSPPYG00000020514 I
ENSPSIG00000003320 Pelodiscus sinensis ENSPSIG00000003320 I
ENSSHAG00000014376 Sarcophilus harrisii ENSSHAG00000014376 I
ENSTSYG00000009619 Tarsius syrichta ENSTSYG00000009619 I
ENSXMAG00000011901 Xiphophorus maculatus ENSXMAG00000011901 I
Gfo_R008526 Geospiza fortis Gfo_R008526 I
HDX Tursiops truncatus ENSTTRG00000000100 I
Hdx Rattus norvegicus ENSRNOG00000037799 I
HDX Sorex araneus ENSSARG00000009351 I
HDX Taeniopygia guttata ENSTGUG00000002499 I
hdx Takifugu rubripes ENSTRUG00000008150 I
HDX Pteropus vampyrus ENSPVAG00000015095 I
HDX Vicugna pacos ENSVPAG00000003255 I
HDX Equus caballus ENSECAG00000024862 I
hdx Danio rerio ENSDARG00000079382 I
HDX Cavia porcellus ENSCPOG00000014501 I
HDX Callithrix jacchus ENSCJAG00000008295 I
HDX Canis familiaris ENSCAFG00000017380 I
hdx Xenopus tropicalis XB-GENE-853748 I
HDX Felis catus ENSFCAG00000005781 I
HDX Gallus gallus ENSGALG00000007041 I
HDX Loxodonta africana ENSLAFG00000028655 I
hdx Gasterosteus aculeatus ENSGACG00000018543 I
HDX Homo sapiens ENSG00000165259 D
HDX Meleagris gallopavo ENSMGAG00000004732 I
HDX Macaca mulatta ENSMMUG00000020536 I
HDX Monodelphis domestica ENSMODG00000014307 I
HDX Gorilla gorilla ENSGGOG00000005551 I
Hdx Mus musculus ENSMUSG00000034551 D
HDX Echinops telfairi ENSETEG00000018031 I
HDX Erinaceus europaeus ENSEEUG00000011626 I
HDX Oryctolagus cuniculus ENSOCUG00000000903 I
HDX Otolemur garnettii ENSOGAG00000031446 I
HDX Anolis carolinensis ENSACAG00000014116 I
hdx Oryzias latipes ENSORLG00000008466 I
HDX Pan troglodytes ENSPTRG00000022065 I
Myotis_brandtii_HDX_10020373 Myotis brandtii Myotis_brandtii_HDX_10020373 I
Ogr06876 Ophisaurus gracilis Ogr06876 I
Pvit_02951 Pogona vitticeps Pvit_02951 I
rps6kal Tetraodon nigroviridis ENSTNIG00000015774 I