Aan_R011824 (Calypte anna)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Aan_R011824 T317718_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		0.805 0.805
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.793 0.793
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.793 0.793
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.793 0.793
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.793 0.793
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R011824 Rel 31 211

Links

Other Rel family TFs
Other Calypte anna TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000659701 Angiostrongylus cantonensis ACAC_0000659701 N
ACOC_0000451501 Angiostrongylus costaricensis ACOC_0000451501 N
ANCCAN_07722 Ancylostoma caninum ANCCAN_07722 N
ANCCEY_03457 Ancylostoma ceylanicum ANCCEY_03457 N
ANCDUO_02619 Ancylostoma duodenale ANCDUO_02619 N
ASIM_0000091301 Anisakis simplex ASIM_0000091301 I
ASIM_0000512001 Anisakis simplex ASIM_0000512001 N
ASU_06962 Ascaris suum ASU_06962 N
Bm7459 Brugia malayi Bm7459 N
BTMF_0000953701 Brugia timori BTMF_0000953701 N
BXY_1512700 Bursaphelenchus xylophilus BXY_1512700 N
CBG06922 Caenorhabditis briggsae CBG06922 N
CRE15772 Caenorhabditis remanei CRE15772 N
EEL_0000068901 Elaeophora elaphi EEL_0000068901 N
EVEC_0000636701 Enterobius vermicularis EVEC_0000636701 N
Hba_13214 Heterorhabditis bacteriophora Hba_13214 N
HCOI00251100 Haemonchus contortus HCOI00251100 N
HCOI01543700 Haemonchus contortus HCOI01543700 N
HPBE_0002664601 Heligmosomoides bakeri HPBE_0002664601 N
HPLM_0002015601 Haemonchus placei HPLM_0002015601 N
L596_g26009 Steinernema carpocapsae L596_g26009 N
L892_g4529 Steinernema scapterisci L892_g4529 N
L893_g15060 Steinernema glaseri L893_g15060 N
L898_g14583 Steinernema monticolum L898_g14583 N
LOAG_01471 Loa loa LOAG_01471 N
maker-nMf.1.1.scaf00076-augustus-gene-0.21 Meloidogyne floridensis maker-nMf.1.1.scaf00076-augustus-gene-0.21 N
Minc06478 Meloidogyne incognita Minc06478 N
nAv.1.0.1.g05112 Acanthocheilonema viteae nAv.1.0.1.g05112 N
NBR_0000271401 Nippostrongylus brasiliensis NBR_0000271401 N
NBR_0000522801 Nippostrongylus brasiliensis NBR_0000522801 I
nDi.2.2.2.g00640 Dirofilaria immitis nDi.2.2.2.g00640 N
NECAME_19535 Necator americanus NECAME_19535 N
nLs.2.1.2.g02003 Litomosoides sigmodontis nLs.2.1.2.g02003 N
nOo.2.0.1.g00974 Onchocerca ochengi nOo.2.0.1.g00974 N
OFLC_0000052301 Onchocerca flexuosa OFLC_0000052301 N
Ppa-sma-2 Pristionchus pacificus PPA15247 N
PTRK_0000297300 Parastrongyloides trichosuri PTRK_0000297300 N
RSKR_0000082500 Rhabditophanes kr3021 RSKR_0000082500 N
sma-2 Caenorhabditis elegans WBGene00004856 N
SMAD1 Ochotona princeps ENSOPRG00000012775 I
SMUV_0000477801 Syphacia muris SMUV_0000477801 N
SPAL_0001290200 Strongyloides papillosus SPAL_0001290200 N
SSTP_0000571600 Strongyloides stercoralis SSTP_0000571600 N
SVE_0161800 Strongyloides venezuelensis SVE_0161800 N
SVUK_0000145101 Strongylus vulgaris SVUK_0000145101 N
TCLT_0000791701 Thelazia callipaeda TCLT_0000791701 N
WBGene00245189 Onchocerca volvulus WBGene00245189 N
WUBG_02400 Wuchereria bancrofti WUBG_02400 N