RUNX1 (Gorilla gorilla)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSGGOG00000012862 T319393_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		1.000 1.000
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		1.000 1.000
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		1.000 1.000
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		1.000 1.000
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		1.000 1.000
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		1.000 1.000
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		1.000 1.000
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		1.000 1.000
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		1.000 1.000
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		1.000 1.000
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		1.000 1.000
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		1.000 1.000
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.931 0.931
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.931 0.931
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.931 0.931
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.931 0.931
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.931 0.931
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.931 0.931
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.931 0.931
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.931 0.931
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.931 0.931
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.931 0.931
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.931 0.931
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.931 0.931
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.923 0.923
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.923 0.923
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.923 0.923
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.923 0.923
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.923 0.923
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.923 0.923
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.923 0.923
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.923 0.923
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.923 0.923
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.923 0.923
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.923 0.923
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.923 0.923
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.731 0.731
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.731 0.731
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.731 0.731
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000012545 Runt 78 207

Links

Other Runt family TFs
Other Gorilla gorilla TFs

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.000
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.000
BRADI4G21540 Brachypodium distachyon BRADI4G21540 N 0.000
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.000
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.000
F775_32078 Aegilops tauschii F775_32078 N 0.000
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.000
GRMZM2G022365 Zea mays GRMZM2G022365 N 0.000
GRMZM2G157470 Zea mays GRMZM2G157470 N 0.000
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.000
GSMUA_Achr7G01310_001 Musa acuminata GSMUA_Achr7G01310_001 N 0.000
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.000
MDP0000152128 Malus domestica MDP0000152128 N 0.000
MDP0000574053 Malus domestica MDP0000574053 N 0.000
OB12G26010 Oryza brachyantha OB12G26010 N 0.000
OBART12G19140 Oryza barthii OBART12G19140 N 0.000
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.000
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.000
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.000
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.000
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 0.000
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.000
OS12G0620400 Oryza sativa OS12G0620400 N 0.000
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.000
Pavir.Ia01134 Panicum virgatum Pavir.Ia01134 N 0.000
Pavir.Ib04134 Panicum virgatum Pavir.Ib04134 N 0.000
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.000
PK04144.1 Cannabis sativa PK04144.1 N 0.000
Pm027560 Prunus mume Pm027560 N 0.000
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.000
Sb01g013320 Sorghum bicolor Sb01g013320 N 0.000
Sb08g022000 Sorghum bicolor Sb08g022000 N 0.000
Si035862m.g Setaria italica Si035862m.g N 0.000
Traes_5AS_BABE20FBA Triticum aestivum Traes_5AS_BABE20FBA N 0.000
Traes_5BS_19E54A2E0 Triticum aestivum Traes_5BS_19E54A2E0 N 0.000
Traes_5DS_438FF99FC Triticum aestivum Traes_5DS_438FF99FC N 0.000
TRIUR3_27778 Triticum urartu TRIUR3_27778 N 0.000
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.000