ACUA008762 (Anopheles culicifacies)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 ACUA008762 T319735_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.783 0.783
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.783 0.783
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.783 0.783
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.783 0.783
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACUA008762-PA Runt 13 58

Links

Other Runt family TFs
Other Anopheles culicifacies TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30115.m001183 Ricinus communis 30115.m001183 N
cassava2445.valid.m1 Manihot esculenta cassava2445.valid.m1 N
Ciclev10025376m.g Citrus clementina Ciclev10025376m.g N
Eucgr.H01651 Eucalyptus grandis Eucgr.H01651 N
Eucgr.H02009 Eucalyptus grandis Eucgr.H02009 N
evm.TU.supercontig_55.163 Carica papaya evm.TU.supercontig_55.163 N
gene24052-v1.0-hybrid Fragaria vesca gene24052-v1.0-hybrid N
Gorai.007G212100 Gossypium raimondii Gorai.007G212100 N
LjSGA_111419.1 Lotus japonicus LjSGA_111419.1 N
MDP0000236656 Malus domestica MDP0000236656 N
MDP0000258417 Malus domestica MDP0000258417 N
MDP0000314333 Malus domestica MDP0000314333 N
orange1.1g010160m.g Citrus sinensis orange1.1g010160m.g N
PGSC0003DMG400015771 Solanum tuberosum PGSC0003DMG400015771 N
PK03938.1 Cannabis sativa PK03938.1 N
POPTR_0007s11170 Populus trichocarpa POPTR_0007s11170 N
SapurV1A.0711s0090 Salix purpurea SapurV1A.0711s0090 N
SapurV1A.0815s0020 Salix purpurea SapurV1A.0815s0020 N
Solyc02g090710.2 Solanum lycopersicum Solyc02g090710.2 N
TCM_000597 Theobroma cacao TCM_000597 N
VIT_07s0031g00780 Vitis vinifera VIT_07s0031g00780 N