CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA06G13540
(
Glycine max
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
GLYMA06G13540
T320082_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA06G13540.2
RWP-RK
203
251
VLEFDEIKKHFGVPITEAAKRLNVGLTMLKRRCRELSITRWPHRKLKSL
Links
Other
RWP-RK
family TFs
Other
Glycine max
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30024.m001687
Ricinus communis
30024.m001687
N
0.714
AMTR_s00057p00091350
Amborella trichopoda
AMTR_s00057p00091350
I
0.703
Bo2g046220
Brassica oleracea
Bo2g046220
N
0.735
Bo9g108730
Brassica oleracea
Bo9g108730
N
0.714
Bra003088
Brassica rapa
Bra003088
N
0.714
Bra022622
Brassica rapa
Bra022622
N
0.735
Cagra.0084s0050
Capsella grandiflora
Cagra.0084s0050
N
0.735
Carubv10028317m.g
Capsella rubella
Carubv10028317m.g
N
0.735
cassava34339.m1
Manihot esculenta
cassava34339.m1
N
0.714
Ca_03992
Cicer arietinum
Ca_03992
N
0.878
chr1.CM0033.310.nc
Lotus japonicus
chr1.CM0033.310.nc
N
0.776
chr1.CM0033.320.nc
Lotus japonicus
chr1.CM0033.320.nc
N
0.755
chr1.CM0033.390.nc
Lotus japonicus
chr1.CM0033.390.nc
N
0.837
chr4.CM0131.310.nd
Lotus japonicus
chr4.CM0131.310.nd
N
0.776
Cla004331
Citrullus lanatus
Cla004331
N
0.735
evm.TU.supercontig_3.98
Carica papaya
evm.TU.supercontig_3.98
N
0.714
fgenesh1_pm.C_scaffold_8001005
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8001005
N
0.714
GLYMA04G41320
Glycine max
GLYMA04G41320
N
0.898
GLYMA06G13530
Glycine max
GLYMA06G13530
N
0.735
GSMUA_AchrUn_randomG11290_001
Musa acuminata
GSMUA_AchrUn_randomG11290_001
N
0.714
LjSGA_030914.1
Lotus japonicus
LjSGA_030914.1
N
0.775
MDP0000141137
Malus domestica
MDP0000141137
N
0.755
MDP0000819497
Malus domestica
MDP0000819497
N
0.755
mgf025545m
Mimulus guttatus
mgf025545m
N
0.755
MLOC_12609
Hordeum vulgare
MLOC_12609
I
0.703
MTR_0140s0010
Medicago truncatula
MTR_0140s0010
I
0.700
MTR_3g091700
Medicago truncatula
MTR_3g091700
N
0.776
PGSC0003DMG400018531
Solanum tuberosum
PGSC0003DMG400018531
N
0.714
Pm019768
Prunus mume
Pm019768
N
0.755
PRUPE_ppa015130mg
Prunus persica
PRUPE_ppa015130mg
N
0.755
RKD4
Arabidopsis thaliana
AT5G53040
N
0.714
Solyc03g083040.1
Solanum lycopersicum
Solyc03g083040.1
N
0.714
VIT_16s0098g01730
Vitis vinifera
VIT_16s0098g01730
N
0.735