TCM_016510 (Theobroma cacao)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 TCM_016510 T320849_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY25090 RWP-RK 579 627

Links

Other RWP-RK family TFs
Other Theobroma cacao TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004656.1 Alligator sinensis Alligator_sinensis_CCG004656.1 I
Alligator_sinensis_CCG013447.1 Alligator sinensis Alligator_sinensis_CCG013447.1 I
ARHGAP30 Dasypus novemcinctus ENSDNOG00000005811 I
B39674 Xenopus laevis B39674 I
ENSAMEG00000000235 Ailuropoda melanoleuca ENSAMEG00000000235 I
ENSAMEG00000015606 Ailuropoda melanoleuca ENSAMEG00000015606 I
ENSAMXG00000010483 Astyanax mexicanus ENSAMXG00000010483 N
ENSAMXG00000012300 Astyanax mexicanus ENSAMXG00000012300 N
ENSCSAG00000002622 Chlorocebus sabaeus ENSCSAG00000002622 I
ENSCSAG00000004521 Chlorocebus sabaeus ENSCSAG00000004521 I
ENSLOCG00000000641 Lepisosteus oculatus ENSLOCG00000000641 I
ENSMEUG00000009683 Macropus eugenii ENSMEUG00000009683 I
ENSMMUP00000002682 Macaca fascicularis ENSMMUP00000002682 I
ENSMPUG00000007099 Mustela putorius furo ENSMPUG00000007099 I
ENSMPUG00000014181 Mustela putorius furo ENSMPUG00000014181 I
ENSNLEG00000011114 Nomascus leucogenys ENSNLEG00000011114 I
ENSNLEG00000013935 Nomascus leucogenys ENSNLEG00000013935 I
ENSOARG00000003162 Ovis aries ENSOARG00000003162 I
ENSOARG00000004745 Ovis aries ENSOARG00000004745 I
ENSOARG00000009376 Ovis aries ENSOARG00000009376 I
ENSOGAG00000006705 Otolemur garnettii ENSOGAG00000006705 I
ENSONIG00000013775 Oreochromis niloticus ENSONIG00000013775 N
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I
ENSP00000222305-D1 Bos grunniens ENSP00000222305-D1 I
ENSP00000357000-D1 Bos grunniens ENSP00000357000-D1 I
ENSPANG00000011040 Papio anubis ENSPANG00000011040 I
ENSPANG00000016141 Papio anubis ENSPANG00000016141 I
ENSPMAG00000009581 Petromyzon marinus ENSPMAG00000009581 N
ENSPPYG00000000619 Pongo abelii ENSPPYG00000000619 I
ENSPPYG00000009855 Pongo abelii ENSPPYG00000009855 I
ENSPSIG00000008116 Pelodiscus sinensis ENSPSIG00000008116 I
ENSSHAG00000016124 Sarcophilus harrisii ENSSHAG00000016124 I
ENSSTOG00000012364 Ictidomys tridecemlineatus ENSSTOG00000012364 I
ENSSTOG00000022219 Ictidomys tridecemlineatus ENSSTOG00000022219 I
Ogr08237 Ophisaurus gracilis Ogr08237 I
PHUM287950 Pediculus humanus PHUM287950 I
Pvit_07548 Pogona vitticeps Pvit_07548 I
USF1 Pan troglodytes ENSPTRG00000001565 I
USF1 Tupaia belangeri ENSTBEG00000003164 I
USF1 Pteropus vampyrus ENSPVAG00000005489 I
usf1 Oryzias latipes ENSORLG00000015402 I
USF1 Ochotona princeps ENSOPRG00000003858 I
Usf1 Rattus norvegicus ENSRNOG00000004255 I
USF1 Sus scrofa ENSSSCG00000006371 I
usf1 Tetraodon nigroviridis ENSTNIG00000014361 I
USF1 Callithrix jacchus ENSCJAG00000005396 I
usf1 Takifugu rubripes ENSTRUG00000005343 I
USF1 Macaca mulatta ENSMMUG00000002003 I
usf1 Xenopus tropicalis XB-GENE-5918718 I
USF1 Felis catus ENSFCAG00000012307 I
USF1 Homo sapiens ENSG00000158773 D
usf1 Gasterosteus aculeatus ENSGACG00000005115 I
USF1 Gorilla gorilla ENSGGOG00000003935 I
USF1 Loxodonta africana ENSLAFG00000011338 I
USF1 Equus caballus ENSECAG00000004755 I
USF1 Bos taurus ENSBTAG00000017873 I
USF1 Microcebus murinus ENSMICG00000007199 I
USF1 Myotis lucifugus ENSMLUG00000009179 I
USF1 Oryctolagus cuniculus ENSOCUG00000002352 I
USF1 Canis familiaris ENSCAFG00000012689 I
USF1 Monodelphis domestica ENSMODG00000005443 I
usf1 Danio rerio ENSDARG00000041689 N
Usf1 Mus musculus ENSMUSG00000026641 D
USF1 Vicugna pacos ENSVPAG00000008421 I
USF1 Cavia porcellus ENSCPOG00000003957 I
USF1 Tursiops truncatus ENSTTRG00000009151 I
USF1 Choloepus hoffmanni ENSCHOG00000011010 I
usf1.S Xenopus laevis XB-GENE-6255904 I
USF2 Macaca mulatta ENSMMUG00000011291 I
USF2 Equus caballus ENSECAG00000008583 I
USF2 Felis catus ENSFCAG00000008894 I
USF2 Bos taurus ENSBTAG00000017035 I
USF2 Homo sapiens ENSG00000105698 D
usf2 Gasterosteus aculeatus ENSGACG00000002481 N
USF2 Loxodonta africana ENSLAFG00000029360 I
USF2 Dasypus novemcinctus ENSDNOG00000003072 I
USF2 Microcebus murinus ENSMICG00000001519 I
USF2 Canis familiaris ENSCAFG00000007054 I
USF2 Sus scrofa ENSSSCG00000002885 I
USF2 Cavia porcellus ENSCPOG00000012147 I
Usf2 Mus musculus ENSMUSG00000058239 D
USF2 Callithrix jacchus ENSCJAG00000010451 I
USF2 Oryctolagus cuniculus ENSOCUG00000026259 I
USF2 Otolemur garnettii ENSOGAG00000001476 I
USF2 Procavia capensis ENSPCAG00000013941 I
USF2 Pan troglodytes ENSPTRG00000010836 I
USF2 Pteropus vampyrus ENSPVAG00000004161 I
Usf2 Rattus norvegicus ENSRNOG00000053725 I