Bostr.20129s0072 (Boechera stricta)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Bostr.20129s0072 T321060_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.959 0.959
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.20129s0072.1.p RWP-RK 551 599

Links

Other RWP-RK family TFs
Other Boechera stricta TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00206030 Amborella trichopoda AMTR_s00057p00206030 N 0.000
Aquca_017_00223 Aquilegia coerulea Aquca_017_00223 N 0.000
BGIOSGA005119 Oryza indica BGIOSGA005119 N 0.000
BRADI2G59937 Brachypodium distachyon BRADI2G59937 N 0.000
cassava29582.valid.m1 Manihot esculenta cassava29582.valid.m1 N 0.000
cassava29583.valid.m1 Manihot esculenta cassava29583.valid.m1 N 0.000
Ciclev10018617m.g Citrus clementina Ciclev10018617m.g N 0.000
GSMUA_Achr1G11230_001 Musa acuminata GSMUA_Achr1G11230_001 N 0.000
LD Vitis vinifera VIT_07s0104g01580 N 0.000
LPERR01G37480 Leersia perrieri LPERR01G37480 N 0.000
OB01G52060 Oryza brachyantha OB01G52060 N 0.000
OBART01G43050 Oryza barthii OBART01G43050 N 0.000
OGLUM01G47350 Oryza glumaepatula OGLUM01G47350 N 0.000
OLONG_017231 Oryza longistaminata OLONG_017231 N 0.000
ONIVA01G48990 Oryza nivara ONIVA01G48990 N 0.000
OPUNC01G42000 Oryza punctata OPUNC01G42000 N 0.000
orange1.1g001425m.g Citrus sinensis orange1.1g001425m.g N 0.000
ORGLA01G0367900 Oryza glaberrima ORGLA01G0367900 N 0.000
ORUFI01G46480 Oryza rufipogon ORUFI01G46480 N 0.000
OS01G0934300 Oryza sativa OS01G0934300 N 0.000
PDK_20s1602441g001 Phoenix dactylifera PDK_20s1602441g001 N 0.000
PK02496.1 Cannabis sativa PK02496.1 N 0.000
POPTR_0002s20990 Populus trichocarpa POPTR_0002s20990 N 0.000
POPTR_0014s12730 Populus trichocarpa POPTR_0014s12730 N 0.000
Solyc09g074690.2 Solanum lycopersicum Solyc09g074690.2 N 0.000
TCM_004566 Theobroma cacao TCM_004566 N 0.000
Traes_3B_3142C10C9 Triticum aestivum Traes_3B_3142C10C9 N 0.000
Traes_3DL_D4FBDA9DC Triticum aestivum Traes_3DL_D4FBDA9DC N 0.000
TRIUR3_34541 Triticum urartu TRIUR3_34541 N 0.000