CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g023462m.g
(
Citrus sinensis
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02042 (RWP-RK)
IPR003035
orange1.1g023462m.g
T321207_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g023462m
RWP-RK
28
75
SLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKFLS
orange1.1g026116m
RWP-RK
7
36
SLSLSPTPPIISKICRDNGLDRWPYRKFLS
Links
Other
RWP-RK
family TFs
Other
Citrus sinensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB004535
Anopheles albimanus
AALB004535
I
Aan_R003793
Calypte anna
Aan_R003793
I
ACEP21720
Atta cephalotes
ACEP21720
I
ACUA028400
Anopheles culicifacies
ACUA028400
I
Afo_R002068
Aptenodytes forsteri
Afo_R002068
I
AGAP007376
Anopheles gambiae
AGAP007376
I
Alligator_sinensis_CCG020430.1
Alligator sinensis
Alligator_sinensis_CCG020430.1
I
ALUE_0000650501
Ascaris lumbricoides
ALUE_0000650501
I
ANCCAN_07957
Ancylostoma caninum
ANCCAN_07957
I
ANCCEY_15520
Ancylostoma ceylanicum
ANCCEY_15520
I
ANCDUO_00071
Ancylostoma duodenale
ANCDUO_00071
I
ASIM_0001003201
Anisakis simplex
ASIM_0001003201
I
ASU_03710
Ascaris suum
ASU_03710
I
Bm6776
Brugia malayi
Bm6776
I
Brh_R001483
Buceros rhinoceros
Brh_R001483
I
CapteG223273
Capitella teleta
CapteG223273
I
Cflo_01621--XP_001121566.1_APIME
Camponotus floridanus
Cflo_01621--XP_001121566.1_APIME
I
CGI_10002627
Crassostrea gigas
CGI_10002627
I
CGI_10012001
Crassostrea gigas
CGI_10012001
I
Cmyd_10011198
Chelonia mydas
Cmyd_10011198
I
CPIJ010764
Culex quinquefasciatus
CPIJ010764
I
CPIJ017497
Culex quinquefasciatus
CPIJ017497
I
CpipJ_CPIJ010764
Culex pipiens
CpipJ_CPIJ010764
I
CpipJ_CPIJ017497
Culex pipiens
CpipJ_CPIJ017497
I
csin107256
Clonorchis sinensis
csin107256
I
D915_02266
Fasciola hepatica
D915_02266
I
DAPPUDRAFT_300656
Daphnia pulex
DAPPUDRAFT_300656
I
DICVIV_12815
Dictyocaulus viviparus
DICVIV_12815
I
DME_0000143101
Dracunculus medinensis
DME_0000143101
I
ECPE_0000487901
Echinostoma caproni
ECPE_0000487901
I
ENSAMEG00000004435
Ailuropoda melanoleuca
ENSAMEG00000004435
I
ENSAPLG00000002694
Anas platyrhynchos
ENSAPLG00000002694
I
ENSCSAG00000011196
Chlorocebus sabaeus
ENSCSAG00000011196
I
ENSETEG00000000629
Echinops telfairi
ENSETEG00000000629
I
ENSFALG00000002949
Ficedula albicollis
ENSFALG00000002949
I
ENSLACG00000015334
Latimeria chalumnae
ENSLACG00000015334
I
ENSMPUG00000013686
Mustela putorius furo
ENSMPUG00000013686
I
ENSNLEG00000005028
Nomascus leucogenys
ENSNLEG00000005028
I
ENSOARG00000000894
Ovis aries
ENSOARG00000000894
I
ENSP00000345702
Macaca fascicularis
ENSP00000345702
I
ENSP00000345702-D2
Bos grunniens
ENSP00000345702-D2
I
ENSPANG00000009714
Papio anubis
ENSPANG00000009714
I
ENSPMAG00000000964
Petromyzon marinus
ENSPMAG00000000964
I
ENSPPYG00000016588
Pongo abelii
ENSPPYG00000016588
I
ENSPSIG00000013239
Pelodiscus sinensis
ENSPSIG00000013239
I
ENSSHAG00000017808
Sarcophilus harrisii
ENSSHAG00000017808
I
ENSSSCG00000001600
Sus scrofa
ENSSSCG00000001600
I
ENSSSCG00000022941
Sus scrofa
ENSSSCG00000022941
I
ENSSTOG00000023405
Ictidomys tridecemlineatus
ENSSTOG00000023405
I
ENSTSYG00000007176
Tarsius syrichta
ENSTSYG00000007176
I
estExt_fgenesh2_pg.C_2670023
Branchiostoma floridae
estExt_fgenesh2_pg.C_2670023
I
fgenesh2_pg.scaffold_208000070
Branchiostoma floridae
fgenesh2_pg.scaffold_208000070
I
GB50732
Apis mellifera
GB50732
I
GPUH_0002134401
Gongylonema pulchrum
GPUH_0002134401
I
HCOI00898900
Haemonchus contortus
HCOI00898900
I
HelroG146050
Helobdella robusta
HelroG146050
I
HHAL009455-PA
Halyomorpha halys
HHAL009455-PA
I
HPBE_0000764601
Heligmosomoides bakeri
HPBE_0000764601
I
HPLM_0000552201
Haemonchus placei
HPLM_0000552201
I
Hsal_09569--XP_001121566.1_APIME
Harpegnathos saltator
Hsal_09569--XP_001121566.1_APIME
I
ISCW017122
Ixodes scapularis
ISCW017122
I
L889_g30157
Steinernema feltiae
L889_g30157
I
LDEC000161
Leptinotarsa decemlineata
LDEC000161
I
LOAG_02863
Loa loa
LOAG_02863
I
maker-nMf.1.1.scaf00089-snap-gene-0.29
Meloidogyne floridensis
maker-nMf.1.1.scaf00089-snap-gene-0.29
I
MDOA015095
Musca domestica
MDOA015095
I
MESCA012339
Megaselia scalaris
MESCA012339
I
MhA1_Contig2248.frz3.gene3
Meloidogyne hapla
MhA1_Contig2248.frz3.gene3
I
ML027313a
Mnemiopsis leidyi
ML027313a
I
nAv.1.0.1.g00776
Acanthocheilonema viteae
nAv.1.0.1.g00776
I
NBR_0000887901
Nippostrongylus brasiliensis
NBR_0000887901
I
nDi.2.2.2.g05199
Dirofilaria immitis
nDi.2.2.2.g05199
I
NECAME_09605
Necator americanus
NECAME_09605
I
NFYA
Anolis carolinensis
ENSACAG00000016527
I
NFYA
Bos taurus
ENSBTAG00000009905
I
NFYA
Canis familiaris
ENSCAFG00000001580
I
NFYA
Callithrix jacchus
ENSCJAG00000004074
I
NFYA
Cavia porcellus
ENSCPOG00000011146
I
NFYA
Dasypus novemcinctus
ENSDNOG00000039692
I
Nfya
Dipodomys ordii
ENSDORG00000006450
I
NFYA
Equus caballus
ENSECAG00000007952
I
NFYA
Felis catus
ENSFCAG00000027813
I
NFYA
Homo sapiens
ENSG00000001167
D
NFYA
Gallus gallus
ENSGALG00000003247
I
NFYA
Gorilla gorilla
ENSGGOG00000008485
I
NFYA
Loxodonta africana
ENSLAFG00000016570
I
NFYA
Meleagris gallopavo
ENSMGAG00000010140
I
NFYA
Myotis lucifugus
ENSMLUG00000008253
I
NFYA
Macaca mulatta
ENSMMUG00000021173
I
NFYA
Monodelphis domestica
ENSMODG00000013084
I
Nfya
Mus musculus
ENSMUSG00000023994
D
NFYA
Ornithorhynchus anatinus
ENSOANG00000011990
I
NFYA
Oryctolagus cuniculus
ENSOCUG00000016869
I
NFYA
Otolemur garnettii
ENSOGAG00000002636
I
NFYA
Procavia capensis
ENSPCAG00000011508
I
NFYA
Pan troglodytes
ENSPTRG00000018146
I
NFYA
Pteropus vampyrus
ENSPVAG00000008318
I
Nfya
Rattus norvegicus
ENSRNOG00000012702
I
NFYA
Sus scrofa
ENSSSCG00000001611
I
NFYA
Taeniopygia guttata
ENSTGUG00000001832
I
NFYA
Tursiops truncatus
ENSTTRG00000013394
I
NFYA
Vicugna pacos
ENSVPAG00000008028
I
nLs.2.1.2.g05605
Litomosoides sigmodontis
nLs.2.1.2.g05605
I
nOo.2.0.1.g03339
Onchocerca ochengi
nOo.2.0.1.g03339
I
NV16776
Nasonia vitripennis
NV16776
I
PHUM011400
Pediculus humanus
PHUM011400
I
Ppa-nfya-1
Pristionchus pacificus
PPA20666
N
PPAI000251
Phlebotomus papatasi
PPAI000251
I
PTRK_0000025200
Parastrongyloides trichosuri
PTRK_0000025200
N
Pvit_06013
Pogona vitticeps
Pvit_06013
I
RPRC000951
Rhodnius prolixus
RPRC000951
I
Sakowv30001860m.g
Saccoglossus kowalevskii
Sakowv30001860m.g
I
Sakowv30044373m.g
Saccoglossus kowalevskii
Sakowv30044373m.g
I
SBAD_0000676601
Soboliphyme baturini
SBAD_0000676601
I
SINV17788
Solenopsis invicta
SINV17788
I
SMU15029949
Schmidtea mediterranea
SMU15029949
I
SPAL_0000205900
Strongyloides papillosus
SPAL_0000205900
N
SPU_025589
Strongylocentrotus purpuratus
SPU_025589
I
SPU_025737
Strongylocentrotus purpuratus
SPU_025737
I
SSTP_0000922000
Strongyloides stercoralis
SSTP_0000922000
N
SVE_0978200
Strongyloides venezuelensis
SVE_0978200
N
T265_04195
Opisthorchis viverrini
T265_04195
I
Tal_R012767
Tyto alba
Tal_R012767
I
TC007453
Tribolium castaneum
TC007453
I
TCLT_0000871701
Thelazia callipaeda
TCLT_0000871701
I
TCNE_0001890401
Toxocara canis
TCNE_0001890401
I
TELCIR_00805
Teladorsagia circumcincta
TELCIR_00805
I
TMUE_s0062005000
Trichuris muris
TMUE_s0062005000
I
WBGene00242147
Onchocerca volvulus
WBGene00242147
I
WUBG_05875
Wuchereria bancrofti
WUBG_05875
I
YQE_10237
Dendroctonus ponderosae
YQE_10237
I