GMEB2 (Canis familiaris)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSCAFG00000013008 T321633_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.994 1.000
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.994 1.000
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.994 1.000
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.994 1.000
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.994 1.000
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.994 1.000
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.994 1.000
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.992 0.947
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.992 0.933
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.986 0.747
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.986 0.747
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.986 0.733
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.986 0.733
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.986 0.733
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.986 0.733
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.986 0.733
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.981 0.707
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.981 0.693
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.956 0.627
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000019166 SAND 87 162

Links

Other SAND family TFs
Other Canis familiaris TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13522_YKL038W Saccharomyces mikatae 13522_YKL038W I
13626_YKL038W Saccharomyces paradoxus 13626_YKL038W I
14629_YKL038W Saccharomyces bayanus 14629_YKL038W I
AACERI_AaceriAGL083W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL083W I
AGOS_AGL083W Ashbya gossypii AGOS_AGL083W I
CAGL0L01903g Candida glabrata CAGL0L01903g I
KLLA0_F25630g Kluyveromyces lactis KLLA0_F25630g N
KLTH0D07260g Lachancea thermotolerans KLTH0D07260g I
KLTH0D07260g Kluyveromyces thermotolerans KLTH0D07260g I
KNAG_0A07100 Kazachstania naganishii KNAG_0A07100 I
Kpol_1002p5 Vanderwaltozyma polyspora Kpol_1002p5 I
Kwal_8109 Kluyveromyces waltii Kwal_8109 N
LALA0_S02e01068g Lachancea lanzarotensis LALA0_S02e01068g N
NCAS_0A04750 Naumovozyma castellii NCAS_0A04750 I
NCAS_0A12580 Naumovozyma castellii NCAS_0A12580 N
NDAI_0K01800 Naumovozyma dairenensis NDAI_0K01800 I
RGT1 Saccharomyces cerevisiae YKL038W D
SAKL0A09856g Lachancea kluyveri SAKL0A09856g I
Scas_Contig625.5 Saccharomyces castellii Scas_Contig625.5 I
Scas_Contig709.65 Saccharomyces castellii Scas_Contig709.65 N
SU7_2014 Saccharomyces arboricola SU7_2014 I
TPHA_0C04280 Tetrapisispora phaffii TPHA_0C04280 I
ZBAI_03469 Zygosaccharomyces bailii ZBAI_03469 I
ZBAI_08469 Zygosaccharomyces bailii ZBAI_08469 I
ZYRO0E05676g Zygosaccharomyces rouxii ZYRO0E05676g I