CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSLACG00000007355
(
Latimeria chalumnae
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSLACG00000007355
T321740_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN
NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
0.984
0.853
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM
KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.984
0.853
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.984
0.853
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.984
0.853
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM
KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.984
0.853
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.984
0.853
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.984
0.853
GMEB2
M02458_2.00
Anolis carolinensis
NNACGYANN
NNTRCGTNN
PBM
Weirauch et al.(2014)
pTH9219
0.982
0.853
GMEB2
M02462_2.00
Meleagris gallopavo
BBACGYH
DRCGTVV
PBM
Weirauch et al.(2014)
pTH9211
0.982
0.840
GMEB1
M02461_2.00
Meleagris gallopavo
NNACGYNNN
NNNRCGTNN
PBM
Weirauch et al.(2014)
pTH8318
0.975
0.747
ENSMODG00000010947
M02463_2.00
Monodelphis domestica
NNRCGYN
NRCGYNN
PBM
Weirauch et al.(2014)
pTH8671
0.975
0.747
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN
NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
0.975
0.733
Gmeb1
M00190_2.00
Mus musculus
NNRCGYNNN
NNNRCGYNN
PBM
Badis et al.(2009)
Gmeb1_1745
0.975
0.733
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN
NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.975
0.733
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
0.975
0.733
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
0.975
0.733
gmeb1
M02468_2.00
Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN
PBM
Weirauch et al.(2014)
pTH8745
0.972
0.707
gmeb1.S
M02469_2.00
Xenopus laevis
NKACGTVY
RBACGTMN
PBM
Weirauch et al.(2014)
pTH9298
0.972
0.693
ENSCING00000003435
M02459_2.00
Ciona intestinalis
NKACGTMVNN
NNBKACGTMN
PBM
Weirauch et al.(2014)
pTH9356
0.940
0.613
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000008310
SAND
87
162
EPEIIYPITCGESKANLIWRKFVCPGINVKCVQYNELLLSPKEFVHISGKSTLKDWKRAIRMNGVMLRKIMDSGEL
Links
Other
SAND
family TFs
Other
Latimeria chalumnae
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAH84751
Xenopus laevis
AAH84751
I
0.986
Aan_R005833
Calypte anna
Aan_R005833
I
0.976
Aan_R015716
Calypte anna
Aan_R015716
I
0.983
Afo_R008896
Aptenodytes forsteri
Afo_R008896
I
0.975
Afo_R010444
Aptenodytes forsteri
Afo_R010444
I
0.983
Alligator_sinensis_CCG018614.2
Alligator sinensis
Alligator_sinensis_CCG018614.2
I
0.979
Alligator_sinensis_CCG020726.1
Alligator sinensis
Alligator_sinensis_CCG020726.1
I
0.974
Brh_R002176
Buceros rhinoceros
Brh_R002176
I
0.983
Brh_R012802
Buceros rhinoceros
Brh_R012802
I
0.975
Cmyd_10009585
Chelonia mydas
Cmyd_10009585
I
0.984
Cmyd_10009780
Chelonia mydas
Cmyd_10009780
I
0.975
ENSACAG00000010878
Anolis carolinensis
ENSACAG00000010878
I
0.976
ENSAMEG00000001647
Ailuropoda melanoleuca
ENSAMEG00000001647
I
0.984
ENSAMEG00000011405
Ailuropoda melanoleuca
ENSAMEG00000011405
I
0.975
ENSAMXG00000001001
Astyanax mexicanus
ENSAMXG00000001001
I
0.970
ENSAMXG00000001956
Astyanax mexicanus
ENSAMXG00000001956
I
0.947
ENSAMXG00000015681
Astyanax mexicanus
ENSAMXG00000015681
I
0.967
ENSAPLG00000002955
Anas platyrhynchos
ENSAPLG00000002955
I
0.975
ENSAPLG00000010816
Anas platyrhynchos
ENSAPLG00000010816
I
0.984
ENSCING00000003435
Ciona intestinalis
ENSCING00000003435
D
0.940
ENSCPOG00000013402
Cavia porcellus
ENSCPOG00000013402
I
0.975
ENSCSAG00000001017
Chlorocebus sabaeus
ENSCSAG00000001017
I
0.975
ENSCSAG00000016428
Chlorocebus sabaeus
ENSCSAG00000016428
I
0.984
ENSCSAVG00000000320
Ciona savignyi
ENSCSAVG00000000320
I
0.940
ENSFALG00000001378
Ficedula albicollis
ENSFALG00000001378
I
0.975
ENSFALG00000005856
Ficedula albicollis
ENSFALG00000005856
I
0.983
ENSGALG00000000981
Gallus gallus
ENSGALG00000000981
I
0.975
ENSGALG00000027470
Gallus gallus
ENSGALG00000027470
I
0.983
ENSGMOG00000000899
Gadus morhua
ENSGMOG00000000899
I
0.963
ENSGMOG00000013494
Gadus morhua
ENSGMOG00000013494
I
0.900
ENSGMOG00000014002
Gadus morhua
ENSGMOG00000014002
I
0.972
ENSLACG00000011757
Latimeria chalumnae
ENSLACG00000011757
I
0.978
ENSLOCG00000001741
Lepisosteus oculatus
ENSLOCG00000001741
I
0.984
ENSLOCG00000003512
Lepisosteus oculatus
ENSLOCG00000003512
I
0.970
ENSMEUG00000004906
Macropus eugenii
ENSMEUG00000004906
I
0.975
ENSMEUG00000008516
Macropus eugenii
ENSMEUG00000008516
I
0.958
ENSMMUG00000006168
Macaca mulatta
ENSMMUG00000006168
I
0.984
ENSMMUP00000008108
Macaca fascicularis
ENSMMUP00000008108
I
0.955
ENSMODG00000010947
Monodelphis domestica
ENSMODG00000010947
D
0.975
ENSMPUG00000008374
Mustela putorius furo
ENSMPUG00000008374
I
0.984
ENSMPUG00000015503
Mustela putorius furo
ENSMPUG00000015503
I
0.975
ENSNLEG00000009837
Nomascus leucogenys
ENSNLEG00000009837
I
0.975
ENSNLEG00000010094
Nomascus leucogenys
ENSNLEG00000010094
I
0.984
ENSOARG00000002809
Ovis aries
ENSOARG00000002809
I
0.975
ENSOARG00000010596
Ovis aries
ENSOARG00000010596
I
0.984
ENSONIG00000007575
Oreochromis niloticus
ENSONIG00000007575
I
0.965
ENSONIG00000017972
Oreochromis niloticus
ENSONIG00000017972
I
0.968
ENSORLG00000020761
Oryzias latipes
ENSORLG00000020761
I
0.918
ENSP00000266068-D1
Bos grunniens
ENSP00000266068-D1
I
0.984
ENSP00000294409-D1
Bos grunniens
ENSP00000294409-D1
I
0.975
ENSP00000381890
Macaca fascicularis
ENSP00000381890
I
0.975
ENSPANG00000018743
Papio anubis
ENSPANG00000018743
I
0.975
ENSPANG00000024129
Papio anubis
ENSPANG00000024129
I
0.984
ENSPFOG00000002327
Poecilia formosa
ENSPFOG00000002327
I
0.944
ENSPFOG00000004759
Poecilia formosa
ENSPFOG00000004759
I
0.957
ENSPFOG00000017553
Poecilia formosa
ENSPFOG00000017553
I
0.961
ENSPPYG00000001635
Pongo abelii
ENSPPYG00000001635
I
0.975
ENSPPYG00000011242
Pongo abelii
ENSPPYG00000011242
I
0.984
ENSPSIG00000013495
Pelodiscus sinensis
ENSPSIG00000013495
I
0.984
ENSPSIG00000016715
Pelodiscus sinensis
ENSPSIG00000016715
I
0.976
ENSSHAG00000009099
Sarcophilus harrisii
ENSSHAG00000009099
I
0.975
ENSSHAG00000018066
Sarcophilus harrisii
ENSSHAG00000018066
I
0.986
ENSSTOG00000023031
Ictidomys tridecemlineatus
ENSSTOG00000023031
I
0.984
ENSTNIG00000008152
Tetraodon nigroviridis
ENSTNIG00000008152
I
0.886
ENSTNIG00000009672
Tetraodon nigroviridis
ENSTNIG00000009672
I
0.942
ENSTRUG00000014439
Takifugu rubripes
ENSTRUG00000014439
I
0.944
ENSTSYG00000002782
Tarsius syrichta
ENSTSYG00000002782
I
0.939
ENSXMAG00000012852
Xiphophorus maculatus
ENSXMAG00000012852
I
0.961
ENSXMAG00000012875
Xiphophorus maculatus
ENSXMAG00000012875
I
0.957
Gfo_R005287
Geospiza fortis
Gfo_R005287
I
0.983
Gfo_R008934
Geospiza fortis
Gfo_R008934
I
0.975
GMEB1
Bos taurus
ENSBTAG00000001160
I
0.975
GMEB1
Canis familiaris
ENSCAFG00000011711
I
0.975
GMEB1
Callithrix jacchus
ENSCJAG00000009754
I
0.975
gmeb1
Danio rerio
ENSDARG00000062060
I
0.959
GMEB1
Dasypus novemcinctus
ENSDNOG00000025258
I
0.975
GMEB1
Equus caballus
ENSECAG00000009764
I
0.975
GMEB1
Echinops telfairi
ENSETEG00000000775
I
0.939
GMEB1
Felis catus
ENSFCAG00000018209
I
0.975
GMEB1
Homo sapiens
ENSG00000162419
D
0.975
gmeb1
Gasterosteus aculeatus
ENSGACG00000007791
I
0.958
GMEB1
Gorilla gorilla
ENSGGOG00000009221
I
0.975
GMEB1
Loxodonta africana
ENSLAFG00000011849
I
0.975
GMEB1
Meleagris gallopavo
ENSMGAG00000001716
D
0.975
GMEB1
Myotis lucifugus
ENSMLUG00000012602
I
0.975
Gmeb1
Mus musculus
ENSMUSG00000028901
D
0.975
GMEB1
Ornithorhynchus anatinus
ENSOANG00000006127
I
0.975
GMEB1
Oryctolagus cuniculus
ENSOCUG00000010893
I
0.975
gmeb1
Oryzias latipes
ENSORLG00000008294
I
0.964
GMEB1
Pan troglodytes
ENSPTRG00000000438
I
0.975
GMEB1
Pteropus vampyrus
ENSPVAG00000017223
D
0.975
Gmeb1
Rattus norvegicus
ENSRNOG00000010910
I
0.975
GMEB1
Sorex araneus
ENSSARG00000001145
I
0.975
GMEB1
Taeniopygia guttata
ENSTGUG00000000731
I
0.975
gmeb1
Tetraodon nigroviridis
ENSTNIG00000003832
I
0.957
GMEB1
Takifugu rubripes
ENSTRUG00000011964
I
0.965
GMEB1
Tursiops truncatus
ENSTTRG00000013602
I
0.975
GMEB1
Vicugna pacos
ENSVPAG00000006781
I
0.975
gmeb1
Xenopus tropicalis
XB-GENE-1002169
D
0.972
gmeb1.S
Xenopus laevis
XB-GENE-1002174
D
0.972
GMEB2
Anolis carolinensis
ENSACAG00000011613
D
0.982
GMEB2
Bos taurus
ENSBTAG00000014769
I
0.984
GMEB2
Canis familiaris
ENSCAFG00000013008
I
0.984
GMEB2
Callithrix jacchus
ENSCJAG00000010283
I
0.984
GMEB2
Cavia porcellus
ENSCPOG00000025567
I
0.984
GMEB2
Danio rerio
ENSDARG00000093240
I
0.979
GMEB2
Dasypus novemcinctus
ENSDNOG00000041843
I
0.984
GMEB2
Equus caballus
ENSECAG00000019377
I
0.984
GMEB2
Erinaceus europaeus
ENSEEUG00000001478
I
0.955
GMEB2
Felis catus
ENSFCAG00000031273
I
0.984
GMEB2
Homo sapiens
ENSG00000101216
D
0.984
GMEB2
Gorilla gorilla
ENSGGOG00000008653
I
0.984
GMEB2
Loxodonta africana
ENSLAFG00000012335
I
0.981
GMEB2
Meleagris gallopavo
ENSMGAG00000006922
D
0.982
GMEB2
Microcebus murinus
ENSMICG00000010614
I
0.955
GMEB2
Myotis lucifugus
ENSMLUG00000014606
I
0.984
GMEB2
Monodelphis domestica
ENSMODG00000016974
I
0.986
Gmeb2
Mus musculus
ENSMUSG00000038705
D
0.984
GMEB2
Ornithorhynchus anatinus
ENSOANG00000004939
I
0.987
GMEB2
Oryctolagus cuniculus
ENSOCUG00000025815
I
0.984
GMEB2
Otolemur garnettii
ENSOGAG00000008826
I
0.984
GMEB2
Procavia capensis
ENSPCAG00000000522
I
0.956
GMEB2
Pan troglodytes
ENSPTRG00000013744
I
0.984
GMEB2
Pteropus vampyrus
ENSPVAG00000013473
I
0.983
Gmeb2
Rattus norvegicus
ENSRNOG00000013339
I
0.984
GMEB2
Taeniopygia guttata
ENSTGUG00000006996
I
0.983
gmeb2
Xenopus tropicalis
XB-GENE-5755487
I
0.964
gmeb2.S
Xenopus laevis
XB-GENE-5755500
I
0.986
Myotis_brandtii_GMEB1_10029602
Myotis brandtii
Myotis_brandtii_GMEB1_10029602
I
0.975
Myotis_brandtii_GMEB2_10023457
Myotis brandtii
Myotis_brandtii_GMEB2_10023457
I
0.984
Ogr01986
Ophisaurus gracilis
Ogr01986
I
0.975
Ogr06841
Ophisaurus gracilis
Ogr06841
I
0.965
Pvit_01323
Pogona vitticeps
Pvit_01323
I
0.982
Pvit_15570
Pogona vitticeps
Pvit_15570
I
0.975
si:ch73-302a13.2
Gasterosteus aculeatus
ENSGACG00000003620
I
0.960
si:ch73-302a13.2
Tetraodon nigroviridis
ENSTNIG00000002528
I
0.957
si:ch73-302a13.2
Takifugu rubripes
ENSTRUG00000012194
I
0.948
Tal_R007596
Tyto alba
Tal_R007596
I
0.983