OPUNC09G13250 (Oryza punctata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OPUNC09G13250 T322868_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.931 0.747
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.920 0.653
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.905 0.680
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.905 0.680
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.905 0.680
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.888 0.667
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC09G13250.1 SBP 80 154

Links

Other SBP family TFs
Other Oryza punctata TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m007263 Ricinus communis 30131.m007263 I
BGIOSGA014092 Oryza indica BGIOSGA014092 N
Bra009346 Brassica rapa Bra009346 I
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I
Cucsa.280970 Cucumis sativus Cucsa.280970 I
GLYMA07G28310 Glycine max GLYMA07G28310 I
GLYMA20G01450 Glycine max GLYMA20G01450 I
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I
GRMZM2G149958 Zea mays GRMZM2G149958 I
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I
GSMUA_Achr9G21870_001 Musa acuminata GSMUA_Achr9G21870_001 N
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N
LPERR04G25100 Leersia perrieri LPERR04G25100 N
OB04G36550 Oryza brachyantha OB04G36550 N
OBART04G29570 Oryza barthii OBART04G29570 N
OGLUM04G29490 Oryza glumaepatula OGLUM04G29490 N
OMERI04G25000 Oryza meridionalis OMERI04G25000 N
ONIVA04G28100 Oryza nivara ONIVA04G28100 N
OPUNC04G27130 Oryza punctata OPUNC04G27130 N
ORGLA04G0258700 Oryza glaberrima ORGLA04G0258700 N
ORUFI04G31270 Oryza rufipogon ORUFI04G31270 N
OS04G0676700 Oryza sativa OS04G0676700 N
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N
PK13672.1 Cannabis sativa PK13672.1 I
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I
Sb06g032880 Sorghum bicolor Sb06g032880 N
Si022762m.g Setaria italica Si022762m.g N
TCM_007672 Theobroma cacao TCM_007672 I
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I