evm.TU.supercontig_56.16 (Carica papaya)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 evm.TU.supercontig_56.16 T324183_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_56.16 Sigma 70 328 398

Links

Other Sigma 70 family TFs
Other Carica papaya TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29908.m006268 Ricinus communis 29908.m006268 N
AMTR_s00016p00255950 Amborella trichopoda AMTR_s00016p00255950 N
cassava31065.valid.m1 Manihot esculenta cassava31065.valid.m1 N
cassava4465.m1 Manihot esculenta cassava4465.m1 N
Ciclev10000622m.g Citrus clementina Ciclev10000622m.g N
Cla022491 Citrullus lanatus Cla022491 N
Cucsa.160570 Cucumis sativus Cucsa.160570 N
Eucgr.F02154 Eucalyptus grandis Eucgr.F02154 N
evm.TU.supercontig_21.26 Carica papaya evm.TU.supercontig_21.26 N
GSMUA_Achr6G12970_001 Musa acuminata GSMUA_Achr6G12970_001 N
orange1.1g007452m.g Citrus sinensis orange1.1g007452m.g N
PGSC0003DMG400009342 Solanum tuberosum PGSC0003DMG400009342 N
PK00855.1 Cannabis sativa PK00855.1 N
Pm004407 Prunus mume Pm004407 N
POPTR_0002s10670 Populus trichocarpa POPTR_0002s10670 N
PRUPE_ppa1027142mg Prunus persica PRUPE_ppa1027142mg N
SapurV1A.0004s1050 Salix purpurea SapurV1A.0004s1050 N
SapurV1A.0320s0130 Salix purpurea SapurV1A.0320s0130 N
Solyc04g076360.2 Solanum lycopersicum Solyc04g076360.2 N
Solyc12g087970.1 Solanum lycopersicum Solyc12g087970.1 N
VIT_18s0001g07620 Vitis vinifera VIT_18s0001g07620 N