CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN06012
(
Caenorhabditis brenneri
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
CBN06012
T324412_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN06012
SMAD
31
149
RRARRRFLRLMRGFDAEDVEVIRKAVESDGVDSKACAPGPPMDERVEEDPPDEDSGLIPQIDRPMSMPYLCCKLWRWKDLQVDAALHRLEALPWCRFGRVTINNATVSCCNPYHYALWI
Links
Other
SMAD
family TFs
Other
Caenorhabditis brenneri
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30115.m001183
Ricinus communis
30115.m001183
N
cassava2445.valid.m1
Manihot esculenta
cassava2445.valid.m1
N
Ciclev10025376m.g
Citrus clementina
Ciclev10025376m.g
N
Cucsa.366830
Cucumis sativus
Cucsa.366830
N
Eucgr.H01651
Eucalyptus grandis
Eucgr.H01651
N
Eucgr.H02009
Eucalyptus grandis
Eucgr.H02009
N
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
gene24052-v1.0-hybrid
Fragaria vesca
gene24052-v1.0-hybrid
N
GLYMA17G20175
Glycine max
GLYMA17G20175
N
Gorai.007G212100
Gossypium raimondii
Gorai.007G212100
N
LjSGA_111419.1
Lotus japonicus
LjSGA_111419.1
N
Lus10035416.g
Linum usitatissimum
Lus10035416.g
N
MDP0000236656
Malus domestica
MDP0000236656
N
MDP0000258417
Malus domestica
MDP0000258417
N
MDP0000314333
Malus domestica
MDP0000314333
N
orange1.1g010160m.g
Citrus sinensis
orange1.1g010160m.g
N
PGSC0003DMG400015771
Solanum tuberosum
PGSC0003DMG400015771
N
PK03938.1
Cannabis sativa
PK03938.1
N
POPTR_0007s11170
Populus trichocarpa
POPTR_0007s11170
N
Solyc02g090710.2
Solanum lycopersicum
Solyc02g090710.2
N
TCM_000597
Theobroma cacao
TCM_000597
N
VIT_07s0031g00780
Vitis vinifera
VIT_07s0031g00780
N