CAGL0L02013g (Candida glabrata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CAGL0L02013g T326797_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.692 0.869
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.692 0.869
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAG61827 Sox 306 374
CAG61827 Sox 379 446

Links

Other Sox family TFs
Other Candida glabrata TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I
BGIOSGA005630 Oryza indica BGIOSGA005630 I
BGIOSGA022580 Oryza indica BGIOSGA022580 I
BRADI1G45170 Brachypodium distachyon BRADI1G45170 N
BRADI3G59410 Brachypodium distachyon BRADI3G59410 N
F775_00225 Aegilops tauschii F775_00225 I
F775_07483 Aegilops tauschii F775_07483 I
GRMZM2G105641 Zea mays GRMZM2G105641 N
GRMZM2G392306 Zea mays GRMZM2G392306 I
LPERR02G26470 Leersia perrieri LPERR02G26470 N
LPERR06G07570 Leersia perrieri LPERR06G07570 I
MLOC_12609 Hordeum vulgare MLOC_12609 I
MLOC_59560 Hordeum vulgare MLOC_59560 I
OB02G39310 Oryza brachyantha OB02G39310 I
OB06G17750 Oryza brachyantha OB06G17750 I
OBART02G32320 Oryza barthii OBART02G32320 I
OGLUM02G32960 Oryza glumaepatula OGLUM02G32960 I
OLONG_016325 Oryza longistaminata OLONG_016325 I
OMERI02G30990 Oryza meridionalis OMERI02G30990 I
OMERI06G09770 Oryza meridionalis OMERI06G09770 I
ONIVA06G04700 Oryza nivara ONIVA06G04700 I
ONIVA06G09450 Oryza nivara ONIVA06G09450 I
OPUNC02G29870 Oryza punctata OPUNC02G29870 I
OPUNC06G07940 Oryza punctata OPUNC06G07940 I
ORGLA02G0278600 Oryza glaberrima ORGLA02G0278600 I
ORGLA06G0077700 Oryza glaberrima ORGLA06G0077700 I
ORUFI02G34010 Oryza rufipogon ORUFI02G34010 I
ORUFI06G08510 Oryza rufipogon ORUFI06G08510 I
OS06G0228950 Oryza sativa OS06G0228950 I
Pavir.Aa00708 Panicum virgatum Pavir.Aa00708 I
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I
Pavir.Da01160 Panicum virgatum Pavir.Da01160 I
Pavir.J13146 Panicum virgatum Pavir.J13146 I
Pavir.J14787 Panicum virgatum Pavir.J14787 N
PDK_20s1383532g001 Phoenix dactylifera PDK_20s1383532g001 I
Sb10g008120 Sorghum bicolor Sb10g008120 I
Si008273m.g Setaria italica Si008273m.g I
Si019159m.g Setaria italica Si019159m.g N
Si020172m.g Setaria italica Si020172m.g I
Traes_6BL_301505440 Triticum aestivum Traes_6BL_301505440 I
Traes_6DL_8ECBBC867 Triticum aestivum Traes_6DL_8ECBBC867 I
Traes_7DS_405F08A53 Triticum aestivum Traes_7DS_405F08A53 I
TRIUR3_19503 Triticum urartu TRIUR3_19503 I