OS09G0551600 (Oryza sativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OS09G0551600 T331716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.607 0.652
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS09T0551600-01 Sox 28 97

Links

Other Sox family TFs
Other Oryza sativa TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000181 Aedes aegypti AAEL000181 N
AALB006114 Anopheles albimanus AALB006114 I
AALB009551 Anopheles albimanus AALB009551 N
Aan_R003365 Calypte anna Aan_R003365 I
Aan_R005450 Calypte anna Aan_R005450 I
AARA005668 Anopheles arabiensis AARA005668 I
AARA006496 Anopheles arabiensis AARA006496 N
AATE004647 Anopheles atroparvus AATE004647 N
ACAC_0000432501 Angiostrongylus cantonensis ACAC_0000432501 I
ACEP13202 Atta cephalotes ACEP13202 I
ACEP25803 Atta cephalotes ACEP25803 N
ACHR006211 Anopheles christyi ACHR006211 N
ACHR006643 Anopheles christyi ACHR006643 I
ACOM033657 Anopheles coluzzii ACOM033657 N
ACUA025632 Anopheles culicifacies ACUA025632 N
ACYPI001480 Acyrthosiphon pisum ACYPI001480 N
ADAC005840 Anopheles darlingi ADAC005840 N
ADIR010123 Anopheles dirus ADIR010123 N
AEPI009418 Anopheles epiroticus AEPI009418 N
AEPI009874 Anopheles epiroticus AEPI009874 I
AFAF001135 Anopheles farauti AFAF001135 N
Afo_R010710 Aptenodytes forsteri Afo_R010710 I
AFUN001272 Anopheles funestus AFUN001272 N
AFUN009066 Anopheles funestus AFUN009066 I
AGAP001099 Anopheles gambiae AGAP001099 N
Alligator_sinensis_CCG000956.1 Alligator sinensis Alligator_sinensis_CCG000956.1 I
AMAM022417 Anopheles maculatus AMAM022417 N
AMAM023294 Anopheles maculatus AMAM023294 I
AMEC012325 Anopheles melas AMEC012325 N
AMEM003228 Anopheles merus AMEM003228 N
AMIN002364 Anopheles minimus AMIN002364 N
ANCCAN_15156 Ancylostoma caninum ANCCAN_15156 I
ANCCEY_04867 Ancylostoma ceylanicum ANCCEY_04867 I
ANCDUO_03470 Ancylostoma duodenale ANCDUO_03470 I
AQUA001810 Anopheles quadriannulatus AQUA001810 N
ASIS018375 Anopheles sinensis ASIS018375 N
ASTEI03846 Anopheles stephensi ASTEI03846 I
ASTEI10740 Anopheles stephensi ASTEI10740 N
augustus_masked-nMf.1.1.scaf02274-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf02274-processed-gene-0.0 I
augustus_masked-nMf.1.1.scaf02399-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf02399-processed-gene-0.1 I
A_07912 Schistosoma haematobium A_07912 I
BGIBMGA001296 Bombyx mori BGIBMGA001296 I
BGIBMGA010711 Bombyx mori BGIBMGA010711 N
BGLB012440 Biomphalaria glabrata BGLB012440 I
BTMF_0000479701 Brugia timori BTMF_0000479701 I
BXY_0028000 Bursaphelenchus xylophilus BXY_0028000 I
BXY_1656000 Bursaphelenchus xylophilus BXY_1656000 I
CapteG221038 Capitella teleta CapteG221038 I
CBG00835 Caenorhabditis briggsae CBG00835 I
CBG08820 Caenorhabditis briggsae CBG08820 I
CBG08835 Caenorhabditis briggsae CBG08835 I
CBG11867 Caenorhabditis briggsae CBG11867 N
CBG13954 Caenorhabditis briggsae CBG13954 I
CBG15248 Caenorhabditis briggsae CBG15248 I
CBN07735 Caenorhabditis brenneri CBN07735 N
CBN31697 Caenorhabditis brenneri CBN31697 N
Cflo_01038--XP_625055.2_APIME Camponotus floridanus Cflo_01038--XP_625055.2_APIME N
Cflo_02996--XP_396511.3_APIME Camponotus floridanus Cflo_02996--XP_396511.3_APIME I
CGOC_0000700501 Cylicostephanus goldi CGOC_0000700501 I
CJA03316 Caenorhabditis japonica CJA03316 N
CJA15366 Caenorhabditis japonica CJA15366 I
CJA17574 Caenorhabditis japonica CJA17574 I
CJA30740 Caenorhabditis japonica CJA30740 N
CLEC012052 Cimex lectularius CLEC012052 I
Cmyd_10010311 Chelonia mydas Cmyd_10010311 I
CPIJ007271 Culex quinquefasciatus CPIJ007271 N
CpipJ_CPIJ007271 Culex pipiens CpipJ_CPIJ007271 N
CRE14258 Caenorhabditis remanei CRE14258 N
CRE25660 Caenorhabditis remanei CRE25660 I
CRE26759 Caenorhabditis remanei CRE26759 I
csin104013 Clonorchis sinensis csin104013 I
D915_04145 Fasciola hepatica D915_04145 I
D917_09895 Trichinella nativa D917_09895 I
D918_08596 Trichuris suis D918_08596 I
D918_09295 Trichuris suis D918_09295 I
DAPPUDRAFT_304382 Daphnia pulex DAPPUDRAFT_304382 N
DAPPUDRAFT_8447 Daphnia pulex DAPPUDRAFT_8447 I
DICVIV_12912 Dictyocaulus viviparus DICVIV_12912 I
DICVIV_13767 Dictyocaulus viviparus DICVIV_13767 I
DILT_0000398501 Diphyllobothrium latum DILT_0000398501 I
DILT_0000438001 Diphyllobothrium latum DILT_0000438001 I
ECANG7_01477 Echinococcus canadensis ECANG7_01477 I
ECPE_0000599301 Echinostoma caproni ECPE_0000599301 I
elf-1 Caenorhabditis elegans WBGene00016029 I
ELF1 Pteropus vampyrus ENSPVAG00000014633 I
ELF2 Tursiops truncatus ENSTTRG00000013559 I
ELF4 Callithrix jacchus ENSCJAG00000002612 I
EmuJ_000770200 Echinococcus multilocularis EmuJ_000770200 I
EmuJ_000770300 Echinococcus multilocularis EmuJ_000770300 I
ENSCING00000003572 Ciona intestinalis ENSCING00000003572 N
ENSCING00000009952 Ciona intestinalis ENSCING00000009952 I
ENSCING00000022310 Ciona intestinalis ENSCING00000022310 I
ENSCJAG00000032841 Callithrix jacchus ENSCJAG00000032841 I
ENSCPOG00000026422 Cavia porcellus ENSCPOG00000026422 I
ENSCSAVG00000004962 Ciona savignyi ENSCSAVG00000004962 I
ENSECAG00000021269 Equus caballus ENSECAG00000021269 I
ENSETEG00000014417 Echinops telfairi ENSETEG00000014417 I
ENSGMOG00000019595 Gadus morhua ENSGMOG00000019595 I
ENSLOCG00000004449 Lepisosteus oculatus ENSLOCG00000004449 I
ENSLOCG00000004635 Lepisosteus oculatus ENSLOCG00000004635 I
ENSMGAG00000003467 Meleagris gallopavo ENSMGAG00000003467 I
ENSMGAG00000016365 Meleagris gallopavo ENSMGAG00000016365 I
ENSMMUG00000017882 Macaca mulatta ENSMMUG00000017882 I
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N
ENSMODG00000029692 Monodelphis domestica ENSMODG00000029692 I
ENSOANG00000022349 Ornithorhynchus anatinus ENSOANG00000022349 I
ENSSHAG00000008931 Sarcophilus harrisii ENSSHAG00000008931 I
ENSSSCG00000003049 Sus scrofa ENSSSCG00000003049 I
ENSTBEG00000014406 Tupaia belangeri ENSTBEG00000014406 I
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N
ENSVPAG00000009100 Vicugna pacos ENSVPAG00000009100 I
ENSXMAG00000000661 Xiphophorus maculatus ENSXMAG00000000661 I
ERF Procavia capensis ENSPCAG00000016986 I
ETV3 Pteropus vampyrus ENSPVAG00000010725 I
Etv4 Dipodomys ordii ENSDORG00000013847 I
ETV5 Microcebus murinus ENSMICG00000010633 I
F19F10.1 Caenorhabditis elegans WBGene00017598 D
fgenesh2_pg.scaffold_297000075 Branchiostoma floridae fgenesh2_pg.scaffold_297000075 I
GA10956 Drosophila pseudoobscura FBgn0071012 N
GABPA Microcebus murinus ENSMICG00000006341 I
GABPA Ochotona princeps ENSOPRG00000009283 I
GB42921 Apis mellifera GB42921 N
GB50156 Apis mellifera GB50156 I
GB50829 Apis mellifera GB50829 I
GE10775 Drosophila yakuba FBgn0228617 N
GF23180 Drosophila ananassae FBgn0100174 N
GG12321 Drosophila erecta FBgn0104611 N
GH18462 Drosophila grimshawi FBgn0125929 N
GJ23670 Drosophila virilis FBgn0210767 N
GK13168 Drosophila willistoni FBgn0215177 N
GL13862 Drosophila persimilis FBgn0151467 N
GM22062 Drosophila sechellia FBgn0176933 N
GPLIN_000915100 Globodera pallida GPLIN_000915100 I
HCOI00329800 Haemonchus contortus HCOI00329800 I
HCOI00762400 Haemonchus contortus HCOI00762400 I
HDID_0000070301 Hymenolepis diminuta HDID_0000070301 I
HDID_0000070401 Hymenolepis diminuta HDID_0000070401 I
HDID_0001106001 Hymenolepis diminuta HDID_0001106001 I
HelroG138329 Helobdella robusta HelroG138329 I
HelroG163707 Helobdella robusta HelroG163707 I
HelroG84068 Helobdella robusta HelroG84068 I
HHAL005871-PA Halyomorpha halys HHAL005871-PA I
HMEL006186 Heliconius melpomene HMEL006186 N
HmN_000737000 Hymenolepis microstoma HmN_000737000 I
HmN_000737100 Hymenolepis microstoma HmN_000737100 I
HmN_000858700 Hymenolepis microstoma HmN_000858700 I
HNAJ_0000526201 Hymenolepis nana HNAJ_0000526201 I
HNAJ_0000543801 Hymenolepis nana HNAJ_0000543801 I
HNAJ_0000775301 Hymenolepis nana HNAJ_0000775301 I
HPBE_0000888101 Heligmosomoides bakeri HPBE_0000888101 I
HPBE_0000961401 Heligmosomoides bakeri HPBE_0000961401 I
HPBE_0001545001 Heligmosomoides bakeri HPBE_0001545001 I
HPLM_0001735901 Haemonchus placei HPLM_0001735901 I
Hsal_02676--XP_625055.2_APIME Harpegnathos saltator Hsal_02676--XP_625055.2_APIME N
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N
Hsal_06802--XP_396511.3_APIME Harpegnathos saltator Hsal_06802--XP_396511.3_APIME I
ISCW002717 Ixodes scapularis ISCW002717 I
ISCW005284 Ixodes scapularis ISCW005284 I
ISCW005293 Ixodes scapularis ISCW005293 N
ISCW015686 Ixodes scapularis ISCW015686 I
KGM_06850 Danaus plexippus KGM_06850 N
KGM_21536 Danaus plexippus KGM_21536 I
L596_g13894 Steinernema carpocapsae L596_g13894 I
L596_g17057 Steinernema carpocapsae L596_g17057 I
L596_g92 Steinernema carpocapsae L596_g92 I
L798_12146 Zootermopsis nevadensis L798_12146 N
L889_g13125 Steinernema feltiae L889_g13125 N
L889_g16275 Steinernema feltiae L889_g16275 I
L889_g5244 Steinernema feltiae L889_g5244 I
L892_g9736 Steinernema scapterisci L892_g9736 I
L893_g30524 Steinernema glaseri L893_g30524 I
L898_g5545 Steinernema monticolum L898_g5545 I
LCUP007789 Lucilia cuprina LCUP007789 N
LDEC007066 Leptinotarsa decemlineata LDEC007066 N
LDEC022528 Leptinotarsa decemlineata LDEC022528 I
LLOJ004028 Lutzomyia longipalpis LLOJ004028 N
LotgiG176647 Lottia gigantea LotgiG176647 N
MCINX000664 Melitaea cinxia MCINX000664 I
MCINX010888 Melitaea cinxia MCINX010888 I
MCOS_0000274201 Mesocestoides corti MCOS_0000274201 I
MCOS_0000274301 Mesocestoides corti MCOS_0000274301 I
MDOA008474 Musca domestica MDOA008474 N
MESCA005353 Megaselia scalaris MESCA005353 I
MESCA007902 Megaselia scalaris MESCA007902 N
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N
Minc06622 Meloidogyne incognita Minc06622 N
Minc06986 Meloidogyne incognita Minc06986 I
ML10621a Mnemiopsis leidyi ML10621a I
Myotis_brandtii_ETS2_10002413 Myotis brandtii Myotis_brandtii_ETS2_10002413 I
Myotis_brandtii_ETV4_10015278 Myotis brandtii Myotis_brandtii_ETV4_10015278 I
NBR_0000991901 Nippostrongylus brasiliensis NBR_0000991901 I
nDi.2.2.2.g07516 Dirofilaria immitis nDi.2.2.2.g07516 I
nDi.2.2.2.g08083 Dirofilaria immitis nDi.2.2.2.g08083 I
NEMVEDRAFT_v1g138886 Nematostella vectensis NEMVEDRAFT_v1g138886 I
NEMVEDRAFT_v1g240009 Nematostella vectensis NEMVEDRAFT_v1g240009 N
NEMVEDRAFT_v1g29806 Nematostella vectensis NEMVEDRAFT_v1g29806 I
NEMVEDRAFT_v1g81232 Nematostella vectensis NEMVEDRAFT_v1g81232 I
nLs.2.1.2.g01756 Litomosoides sigmodontis nLs.2.1.2.g01756 I
nOo.2.0.1.g09936 Onchocerca ochengi nOo.2.0.1.g09936 I
nRc.2.0.1.g05364 Romanomermis culicivorax nRc.2.0.1.g05364 I
NV12052 Nasonia vitripennis NV12052 I
Ocbimv22008771m.g Octopus bimaculoides Ocbimv22008771m.g I
OESDEN_04872 Oesophagostomum dentatum OESDEN_04872 I
OESDEN_16524 Oesophagostomum dentatum OESDEN_16524 I
pbrm-1 Caenorhabditis elegans WBGene00007042 N
PEQ_0001301701 Parascaris equorum PEQ_0001301701 I
PHUM244090 Pediculus humanus PHUM244090 N
PHUM368570 Pediculus humanus PHUM368570 I
PHUM503640 Pediculus humanus PHUM503640 I
polybromo Drosophila melanogaster FBgn0039227 N
PPA01782 Pristionchus pacificus PPA01782 I
PPA02656 Pristionchus pacificus PPA02656 I
PPA02658 Pristionchus pacificus PPA02658 I
PPAI002532 Phlebotomus papatasi PPAI002532 N
PPAI006589 Phlebotomus papatasi PPAI006589 I
PTRK_0000680000 Parastrongyloides trichosuri PTRK_0000680000 I
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N
RPRC013518 Rhodnius prolixus RPRC013518 I
RPRC014309 Rhodnius prolixus RPRC014309 N
RPRC015186 Rhodnius prolixus RPRC015186 I
RSKR_0000370800 Rhabditophanes kr3021 RSKR_0000370800 I
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N
Sakowv30001869m.g Saccoglossus kowalevskii Sakowv30001869m.g I
scaffold216-EXSNAP2012.7 Pristionchus exspectatus scaffold216-EXSNAP2012.7 I
SCUD_0001741701 Schistosoma curassoni SCUD_0001741701 I
SINV16486 Solenopsis invicta SINV16486 N
Sjc_0045590 Schistosoma japonicum Sjc_0045590 I
SMAR009325 Strigamia maritima SMAR009325 N
SMAR015178 Strigamia maritima SMAR015178 I
SMTD_0000204001 Schistosoma mattheei SMTD_0000204001 I
SNAPOd2T00009984001 Oikopleura dioica SNAPOd2T00009984001 I
SNAPOd2T00018143001 Oikopleura dioica SNAPOd2T00018143001 I
SPAL_0000294300 Strongyloides papillosus SPAL_0000294300 I
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N
SPER_0002229601 Spirometra erinaceieuropaei SPER_0002229601 I
SPER_0002333601 Spirometra erinaceieuropaei SPER_0002333601 I
SPER_0002447201 Spirometra erinaceieuropaei SPER_0002447201 I
SPU_008351 Strongylocentrotus purpuratus SPU_008351 I
SPU_008528 Strongylocentrotus purpuratus SPU_008528 I
SPU_028479 Strongylocentrotus purpuratus SPU_028479 I
SROB_0001733701 Schistosoma rodhaini SROB_0001733701 I
SSTP_0000826600 Strongyloides stercoralis SSTP_0000826600 I
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N
SVE_1606500 Strongyloides venezuelensis SVE_1606500 I
T265_00304 Opisthorchis viverrini T265_00304 I
TASK_0000713401 Taenia asiatica TASK_0000713401 I
TC000618 Tribolium castaneum TC000618 N
TC008243 Tribolium castaneum TC008243 I
TCLT_0000555801 Thelazia callipaeda TCLT_0000555801 I
TCNE_0000859601 Toxocara canis TCNE_0000859601 I
TCNE_0001894301 Toxocara canis TCNE_0001894301 I
TELCIR_12433 Teladorsagia circumcincta TELCIR_12433 I
tetur10g01220 Tetranychus urticae tetur10g01220 I
TMUE_s0025002400 Trichuris muris TMUE_s0025002400 I
TOX2 Sorex araneus ENSSARG00000001080 N
tox2 Takifugu rubripes ENSTRUG00000013848 N
TriadG29770 Trichoplax adhaerens TriadG29770 I
TsM_000593600 Taenia solium TsM_000593600 I
TsM_000835300 Taenia solium TsM_000835300 I
TTRE_0000457801 Trichuris trichiura TTRE_0000457801 I
YQE_03066 Dendroctonus ponderosae YQE_03066 I
YQE_05481 Dendroctonus ponderosae YQE_05481 N
YQE_11912 Dendroctonus ponderosae YQE_11912 I