Traes_2DL_6CACFD720 (Triticum aestivum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Traes_2DL_6CACFD720 T332982_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2DL_6CACFD720.1 Sox 27 95

Links

Other Sox family TFs
Other Triticum aestivum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.631
BRADI5G18460 Brachypodium distachyon BRADI5G18460 N 0.603
F775_06533 Aegilops tauschii F775_06533 N 0.741
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.428
GRMZM2G145968 Zea mays GRMZM2G145968 N 0.438
gw1.29.97.1 Naegleria gruberi gw1.29.97.1 N 0.432
LPERR04G17840 Leersia perrieri LPERR04G17840 N 0.514
MLOC_57354 Hordeum vulgare MLOC_57354 N 0.582
MLOC_77667 Hordeum vulgare MLOC_77667 I 0.430
OB04G28810 Oryza brachyantha OB04G28810 N 0.631
OBART04G21800 Oryza barthii OBART04G21800 N 0.631
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.631
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.631
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.631
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.637
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.417
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.631
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.631
OS04G0564600 Oryza sativa OS04G0564600 N 0.631
Pavir.Ga01019 Panicum virgatum Pavir.Ga01019 N 0.436
Pavir.Gb00881 Panicum virgatum Pavir.Gb00881 N 0.436
Pavir.J10680 Panicum virgatum Pavir.J10680 N 0.428
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.438
PK14705.1 Cannabis sativa PK14705.1 I 0.417
Sb06g025440 Sorghum bicolor Sb06g025440 N 0.437
Sb07g000230 Sorghum bicolor Sb07g000230 N 0.428
Si011290m.g Setaria italica Si011290m.g N 0.576
TCM_042534 Theobroma cacao TCM_042534 I 0.433
TELCIR_05566 Teladorsagia circumcincta TELCIR_05566 N 0.424
Traes_2AL_020BC1DF2 Triticum aestivum Traes_2AL_020BC1DF2 N 0.650
Traes_2BL_3EF023231 Triticum aestivum Traes_2BL_3EF023231 N 0.650
Traes_7AL_959534EDB Triticum aestivum Traes_7AL_959534EDB I 0.428
Traes_7BL_871FCAF2F Triticum aestivum Traes_7BL_871FCAF2F I 0.428
Traes_7DL_824BFE90C Triticum aestivum Traes_7DL_824BFE90C I 0.428
TRIUR3_17303 Triticum urartu TRIUR3_17303 N 0.478
TRIUR3_35367 Triticum urartu TRIUR3_35367 I 0.428